Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 AC097488.1-201ENST00000507834 756 ntBASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 EGLN1P1-201ENST00000531623 762 ntBASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 AC026271.3-201ENST00000571884 352 ntBASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 PKD1P6-201ENST00000343738 4769 ntBASIC19.66■□□□□ 0.74
TMEFF1Q8IYR6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 AP005242.2-201ENST00000580065 1175 ntBASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEFF1Q8IYR6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TMEFF1Q8IYR6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TMEFF1Q8IYR6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEFF1Q8IYR6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.64■□□□□ 0.74
TMEFF1Q8IYR6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 PLK5-205ENST00000642079 1969 ntBASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEFF1Q8IYR6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 TSPY14P-201ENST00000303979 915 ntBASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 INGX-201ENST00000359239 846 ntBASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 DGCR10-201ENST00000609839 495 ntBASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMEFF1Q8IYR6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 AC004980.1-204ENST00000429707 299 ntBASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 AC128688.1-201ENST00000487626 519 ntBASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 AC131212.4-201ENST00000623606 975 ntBASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 DPP3P2-201ENST00000416030 1696 ntBASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.62■□□□□ 0.73
TMEFF1Q8IYR6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEFF1Q8IYR6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms