Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 AC128676.1-201ENST00000454392 318 ntBASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 AC069544.1-201ENST00000609399 999 ntBASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 AC073648.6-201ENST00000641589 218 ntBASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 TFP1-202ENST00000475455 1573 ntBASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 AL121829.2-201ENST00000620908 328 ntBASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SCUBE3Q8IX30 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 AP001271.2-201ENST00000624018 1556 ntBASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCUBE3Q8IX30 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCUBE3Q8IX30 AC009237.14-201ENST00000609975 1594 ntBASIC20.77■□□□□ 0.92
SCUBE3Q8IX30 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.77■□□□□ 0.92
SCUBE3Q8IX30 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCUBE3Q8IX30 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCUBE3Q8IX30 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCUBE3Q8IX30 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.77■□□□□ 0.92
SCUBE3Q8IX30 MTDHP1-201ENST00000605323 784 ntBASIC20.77■□□□□ 0.92
SCUBE3Q8IX30 ITM2C-210ENST00000620962 501 ntBASIC20.77■□□□□ 0.92
SCUBE3Q8IX30 AL121906.2-201ENST00000621597 723 ntBASIC20.77■□□□□ 0.92
SCUBE3Q8IX30 TMEM179-206ENST00000616017 1645 ntBASIC20.77■□□□□ 0.92
SCUBE3Q8IX30 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.77■□□□□ 0.92
SCUBE3Q8IX30 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SCUBE3Q8IX30 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SCUBE3Q8IX30 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
SCUBE3Q8IX30 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SCUBE3Q8IX30 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCUBE3Q8IX30 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 KRT18P29-201ENST00000397031 1267 ntBASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCUBE3Q8IX30 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms