Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00346Q8IVM7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 GPX1P1-201ENST00000388829 606 ntBASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 AC006970.2-201ENST00000450065 779 ntBASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 AC023632.3-201ENST00000521633 145 ntBASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.46■□□□□ 0.39
LINC00346Q8IVM7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LINC00346Q8IVM7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LINC00346Q8IVM7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
LINC00346Q8IVM7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 AC087289.5-201ENST00000586076 3175 ntBASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00346Q8IVM7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 PHGDH-210ENST00000641115 1638 ntBASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 AP001271.2-201ENST00000624018 1556 ntBASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00346Q8IVM7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00346Q8IVM7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms