Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 AC120498.9-201ENST00000339021 3867 ntBASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 AL355472.2-201ENST00000422958 438 ntBASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 AC007322.1-201ENST00000426983 750 ntBASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 AL162430.1-201ENST00000480705 870 ntBASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 AC231657.2-201ENST00000624556 255 ntBASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 CYP2T3P-201ENST00000601990 817 ntBASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 AL031963.3-201ENST00000606441 850 ntBASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 MIR5787-201ENST00000611784 55 ntBASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 KRT8P20-201ENST00000423953 1409 ntBASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 KRT16P6-202ENST00000425692 1426 ntBASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 HCG11-201ENST00000411553 5696 ntBASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms