Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 AC120498.9-201ENST00000339021 3867 ntBASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC50Q8IVM0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC50Q8IVM0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 AL355472.2-201ENST00000422958 438 ntBASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 AC007322.1-201ENST00000426983 750 ntBASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 AL162430.1-201ENST00000480705 870 ntBASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 AC231657.2-201ENST00000624556 255 ntBASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC50Q8IVM0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 CYP2T3P-201ENST00000601990 817 ntBASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 AL031963.3-201ENST00000606441 850 ntBASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 MIR5787-201ENST00000611784 55 ntBASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC50Q8IVM0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 KRT8P20-201ENST00000423953 1409 ntBASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 KRT16P6-202ENST00000425692 1426 ntBASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 HCG11-201ENST00000411553 5696 ntBASIC20.78■□□□□ 0.92
CCDC50Q8IVM0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms