Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC25Q86WR0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC25Q86WR0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC25Q86WR0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC25Q86WR0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 AC087633.2-202ENST00000565166 1439 ntBASIC20.36■□□□□ 0.85
CCDC25Q86WR0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CCDC25Q86WR0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 AC123595.1-201ENST00000440769 1046 ntBASIC20.35■□□□□ 0.85
CCDC25Q86WR0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 AC093503.3-201ENST00000624917 2352 ntBASIC20.35■□□□□ 0.85
CCDC25Q86WR0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC25Q86WR0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 AC009237.14-201ENST00000609975 1594 ntBASIC20.34■□□□□ 0.85
CCDC25Q86WR0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC25Q86WR0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC25Q86WR0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC25Q86WR0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC25Q86WR0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC25Q86WR0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC25Q86WR0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC25Q86WR0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC25Q86WR0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC25Q86WR0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC25Q86WR0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC25Q86WR0 KRT18P14-201ENST00000534205 1250 ntBASIC20.33■□□□□ 0.85
CCDC25Q86WR0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC25Q86WR0 UBE2DNL-204ENST00000602536 740 ntBASIC20.33■□□□□ 0.85
CCDC25Q86WR0 AC005837.3-201ENST00000612163 286 ntBASIC20.33■□□□□ 0.85
CCDC25Q86WR0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC25Q86WR0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CCDC25Q86WR0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CCDC25Q86WR0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC25Q86WR0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC25Q86WR0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC25Q86WR0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC25Q86WR0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC25Q86WR0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC25Q86WR0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC25Q86WR0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC25Q86WR0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms