Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF546Q86UE3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 MIR2861-201ENST00000636310 90 ntBASIC16.4■□□□□ 0.22
ZNF546Q86UE3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF546Q86UE3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ZNF546Q86UE3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
ZNF546Q86UE3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ZNF546Q86UE3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 DUX4L19-201ENST00000557448 1267 ntBASIC16.39■□□□□ 0.21
ZNF546Q86UE3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 DPP3P2-201ENST00000416030 1696 ntBASIC16.39■□□□□ 0.21
ZNF546Q86UE3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF546Q86UE3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF546Q86UE3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 NOC2LP2-201ENST00000407594 1944 ntBASIC16.37■□□□□ 0.21
ZNF546Q86UE3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms