Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 AC008040.2-201ENST00000461049 708 ntBASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 AC011558.1-201ENST00000623459 338 ntBASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 PVRIG2P-201ENST00000435460 978 ntBASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 YBX1P2-201ENST00000489612 999 ntBASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
VPS13BQ7Z7G8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 COX11P1-201ENST00000489116 835 ntBASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 AC116407.4-201ENST00000623319 1061 ntBASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 KRT18P16-201ENST00000510337 1294 ntBASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 LIN28AP1-201ENST00000429574 405 ntBASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC12.24□□□□□ -0.45
VPS13BQ7Z7G8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 TSPY5P-201ENST00000426936 936 ntBASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 AC004263.2-201ENST00000617183 678 ntBASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 H19-201ENST00000411754 1788 ntTSL 5 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 LINC01238-205ENST00000567549 1107 ntBASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 AC023511.2-201ENST00000618803 211 ntBASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VPS13BQ7Z7G8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms