Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CDHR3Q6ZTQ4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CDHR3Q6ZTQ4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDHR3Q6ZTQ4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDHR3Q6ZTQ4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDHR3Q6ZTQ4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.82■□□□□ 0.76
CDHR3Q6ZTQ4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDHR3Q6ZTQ4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDHR3Q6ZTQ4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.82■□□□□ 0.76
CDHR3Q6ZTQ4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 BX276092.2-201ENST00000417668 665 ntBASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDHR3Q6ZTQ4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 AC009237.14-201ENST00000609975 1594 ntBASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 AC073210.2-201ENST00000430369 194 ntBASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 MIR4758-201ENST00000577688 71 ntBASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 AC133041.1-202ENST00000642053 222 ntBASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDHR3Q6ZTQ4 CYP21A1P-202ENST00000354927 1481 ntBASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDHR3Q6ZTQ4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 AC093503.3-201ENST00000624917 2352 ntBASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.78■□□□□ 0.76
CDHR3Q6ZTQ4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms