Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 RARRES2P4-201ENST00000514074 484 ntBASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 OR10C1-204ENST00000622521 1039 ntBASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 AL050303.2-201ENST00000619798 666 ntBASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF111Q6ZNA4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF111Q6ZNA4 TMEM179-206ENST00000616017 1645 ntBASIC19.14■□□□□ 0.66
RNF111Q6ZNA4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 AC133552.2-202ENST00000575694 574 ntBASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RNF111Q6ZNA4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 AF201337.1-201ENST00000520239 748 ntBASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 AL121832.2-201ENST00000610979 668 ntBASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF111Q6ZNA4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF111Q6ZNA4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF111Q6ZNA4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF111Q6ZNA4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RNF111Q6ZNA4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
RNF111Q6ZNA4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RNF111Q6ZNA4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF111Q6ZNA4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
RNF111Q6ZNA4 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.12■□□□□ 0.65
RNF111Q6ZNA4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF111Q6ZNA4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF111Q6ZNA4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms