Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXR1Q6PIV2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.52■□□□□ 0.88
FOXR1Q6PIV2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
FOXR1Q6PIV2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXR1Q6PIV2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXR1Q6PIV2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXR1Q6PIV2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.52■□□□□ 0.88
FOXR1Q6PIV2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXR1Q6PIV2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXR1Q6PIV2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
FOXR1Q6PIV2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXR1Q6PIV2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FOXR1Q6PIV2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
FOXR1Q6PIV2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.52■□□□□ 0.87
FOXR1Q6PIV2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.87
FOXR1Q6PIV2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FOXR1Q6PIV2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
FOXR1Q6PIV2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 AC069152.1-201ENST00000438030 544 ntBASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 AC104581.1-202ENST00000635932 2618 ntBASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
FOXR1Q6PIV2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 AL138781.2-201ENST00000617896 1843 ntBASIC20.48■□□□□ 0.87
FOXR1Q6PIV2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms