Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 AC090192.1-201ENST00000517740 490 ntBASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 AC005829.2-201ENST00000571422 1056 ntBASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF549Q6P9A3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 MIR4758-201ENST00000577688 71 ntBASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF549Q6P9A3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 AL109923.1-201ENST00000618799 583 ntBASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF549Q6P9A3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ZNF549Q6P9A3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF549Q6P9A3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF549Q6P9A3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.58■□□□□ 0.73
ZNF549Q6P9A3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF549Q6P9A3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 AC073210.2-201ENST00000430369 194 ntBASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ZNF549Q6P9A3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
ZNF549Q6P9A3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms