Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RNF213Q63HN8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
RNF213Q63HN8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RNF213Q63HN8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
RNF213Q63HN8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RNF213Q63HN8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RNF213Q63HN8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RNF213Q63HN8 AKR1C7P-201ENST00000305623 895 ntBASIC10.62□□□□□ -0.71
RNF213Q63HN8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RNF213Q63HN8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 RCC2P6-201ENST00000526625 1557 ntBASIC10.62□□□□□ -0.71
RNF213Q63HN8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
RNF213Q63HN8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC10.62□□□□□ -0.71
RNF213Q63HN8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 AC007274.1-201ENST00000439805 662 ntBASIC10.61□□□□□ -0.71
RNF213Q63HN8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 PNN-205ENST00000556530 601 ntTSL 2 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 AL023803.3-201ENST00000615559 522 ntBASIC10.61□□□□□ -0.71
RNF213Q63HN8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 CCDC74BP1-201ENST00000508880 1123 ntBASIC10.61□□□□□ -0.71
RNF213Q63HN8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC10.61□□□□□ -0.71
RNF213Q63HN8 AC243591.1-201ENST00000452967 1364 ntBASIC10.61□□□□□ -0.71
RNF213Q63HN8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 NMU-202ENST00000505262 693 ntTSL 3 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 AP001005.1-201ENST00000571755 1248 ntBASIC10.61□□□□□ -0.71
RNF213Q63HN8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RNF213Q63HN8 GK-202ENST00000378941 458 ntTSL 3 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 AC023632.3-201ENST00000521633 145 ntBASIC10.61□□□□□ -0.71
RNF213Q63HN8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC10.61□□□□□ -0.71
RNF213Q63HN8 LINC00167-201ENST00000530583 1419 ntBASIC10.6□□□□□ -0.71
RNF213Q63HN8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 TSPY17P-201ENST00000450329 467 ntBASIC10.6□□□□□ -0.71
RNF213Q63HN8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC10.6□□□□□ -0.71
RNF213Q63HN8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 LINC01124-201ENST00000409786 2117 ntBASIC10.6□□□□□ -0.71
RNF213Q63HN8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
RNF213Q63HN8 NEK4P2-201ENST00000580004 1012 ntBASIC10.6□□□□□ -0.71
RNF213Q63HN8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC10.6□□□□□ -0.71
RNF213Q63HN8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms