Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM27BQ5VT28 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.32■□□□□ 0.36
FAM27BQ5VT28 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.32■□□□□ 0.36
FAM27BQ5VT28 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM27BQ5VT28 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FAM27BQ5VT28 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM27BQ5VT28 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM27BQ5VT28 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FAM27BQ5VT28 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM27BQ5VT28 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM27BQ5VT28 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 UNC93B4-201ENST00000505679 747 ntBASIC17.31■□□□□ 0.36
FAM27BQ5VT28 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 SOX15-203ENST00000570788 1093 ntBASIC17.31■□□□□ 0.36
FAM27BQ5VT28 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.31■□□□□ 0.36
FAM27BQ5VT28 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 UNC93B5-201ENST00000530315 699 ntBASIC17.3■□□□□ 0.36
FAM27BQ5VT28 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 AC008687.6-201ENST00000596318 630 ntBASIC17.3■□□□□ 0.36
FAM27BQ5VT28 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 TREX1-205ENST00000625293 1783 ntBASIC17.3■□□□□ 0.36
FAM27BQ5VT28 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FAM27BQ5VT28 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 AC124283.5-201ENST00000624661 1809 ntBASIC17.29■□□□□ 0.36
FAM27BQ5VT28 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 AL121906.2-201ENST00000621597 723 ntBASIC17.29■□□□□ 0.36
FAM27BQ5VT28 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.29■□□□□ 0.36
FAM27BQ5VT28 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FAM27BQ5VT28 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
FAM27BQ5VT28 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
FAM27BQ5VT28 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM27BQ5VT28 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FAM27BQ5VT28 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.28■□□□□ 0.36
FAM27BQ5VT28 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
FAM27BQ5VT28 AL121829.2-201ENST00000620908 328 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms