Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 AC092338.2-201ENST00000568827 1415 ntBASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 SLC25A1P2-201ENST00000430693 912 ntBASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 TSPY5P-201ENST00000426936 936 ntBASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 TPM4P1-201ENST00000436100 807 ntBASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 LINC01465-201ENST00000408887 1940 ntBASIC13.37□□□□□ -0.27
VPS13DQ5THJ4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 AC004951.3-201ENST00000418645 1148 ntBASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 YBX1P10-201ENST00000444752 975 ntBASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 COX11P1-201ENST00000489116 835 ntBASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13DQ5THJ4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 AC116407.4-201ENST00000623319 1061 ntBASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 AL121956.5-201ENST00000625261 221 ntBASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
VPS13DQ5THJ4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13DQ5THJ4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC13.34□□□□□ -0.27
VPS13DQ5THJ4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13DQ5THJ4 FAM86EP-206ENST00000510506 987 ntBASIC13.34□□□□□ -0.27
VPS13DQ5THJ4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13DQ5THJ4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.34□□□□□ -0.27
VPS13DQ5THJ4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VPS13DQ5THJ4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
VPS13DQ5THJ4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms