Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 MEIS3P1-201ENST00000495167 958 ntBASIC10.91□□□□□ -0.66
UBR4Q5T4S7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 AC004967.1-201ENST00000453589 447 ntBASIC10.91□□□□□ -0.66
UBR4Q5T4S7 TOB2P1-201ENST00000469761 992 ntBASIC10.91□□□□□ -0.66
UBR4Q5T4S7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 AL023803.3-201ENST00000615559 522 ntBASIC10.91□□□□□ -0.66
UBR4Q5T4S7 AC142086.6-201ENST00000621154 1765 ntBASIC10.91□□□□□ -0.66
UBR4Q5T4S7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBR4Q5T4S7 LINC00167-201ENST00000530583 1419 ntBASIC10.91□□□□□ -0.66
UBR4Q5T4S7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 AL139125.2-201ENST00000623134 1869 ntBASIC10.9□□□□□ -0.66
UBR4Q5T4S7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 RPS8P6-201ENST00000426177 609 ntBASIC10.9□□□□□ -0.66
UBR4Q5T4S7 BCRP1-201ENST00000444246 691 ntBASIC10.9□□□□□ -0.66
UBR4Q5T4S7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBR4Q5T4S7 REXO1L6P-202ENST00000619970 1078 ntBASIC10.9□□□□□ -0.66
UBR4Q5T4S7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
UBR4Q5T4S7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC10.9□□□□□ -0.67
UBR4Q5T4S7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
UBR4Q5T4S7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC10.9□□□□□ -0.67
UBR4Q5T4S7 RCC2P6-201ENST00000526625 1557 ntBASIC10.9□□□□□ -0.67
UBR4Q5T4S7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC10.9□□□□□ -0.67
UBR4Q5T4S7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 AC112482.1-201ENST00000492080 688 ntBASIC10.89□□□□□ -0.67
UBR4Q5T4S7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 AP000692.2-201ENST00000608391 879 ntBASIC10.89□□□□□ -0.67
UBR4Q5T4S7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 AC063926.2-201ENST00000623766 1308 ntBASIC10.89□□□□□ -0.67
UBR4Q5T4S7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 AL031284.1-201ENST00000419297 478 ntBASIC10.89□□□□□ -0.67
UBR4Q5T4S7 RNPS1P1-201ENST00000507437 918 ntBASIC10.89□□□□□ -0.67
UBR4Q5T4S7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 AL596442.2-201ENST00000610240 980 ntBASIC10.89□□□□□ -0.67
UBR4Q5T4S7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
UBR4Q5T4S7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 BMF-207ENST00000559701 630 ntTSL 3 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms