Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALFQ53S48 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ALFQ53S48 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ALFQ53S48 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.34■□□□□ 0.85
ALFQ53S48 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.34■□□□□ 0.85
ALFQ53S48 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALFQ53S48 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ALFQ53S48 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ALFQ53S48 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALFQ53S48 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ALFQ53S48 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALFQ53S48 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.33■□□□□ 0.85
ALFQ53S48 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
ALFQ53S48 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ALFQ53S48 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.33■□□□□ 0.85
ALFQ53S48 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALFQ53S48 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALFQ53S48 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ALFQ53S48 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.33■□□□□ 0.85
ALFQ53S48 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.33■□□□□ 0.85
ALFQ53S48 KRASP1-201ENST00000407852 552 ntBASIC20.33■□□□□ 0.85
ALFQ53S48 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.33■□□□□ 0.85
ALFQ53S48 PRKY-204ENST00000533551 1019 ntBASIC20.33■□□□□ 0.85
ALFQ53S48 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.33■□□□□ 0.85
ALFQ53S48 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.33■□□□□ 0.85
ALFQ53S48 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALFQ53S48 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALFQ53S48 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALFQ53S48 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
ALFQ53S48 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ALFQ53S48 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ALFQ53S48 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALFQ53S48 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALFQ53S48 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALFQ53S48 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.32■□□□□ 0.84
ALFQ53S48 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALFQ53S48 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALFQ53S48 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.32■□□□□ 0.84
ALFQ53S48 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.32■□□□□ 0.84
ALFQ53S48 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.32■□□□□ 0.84
ALFQ53S48 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
ALFQ53S48 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.32■□□□□ 0.84
ALFQ53S48 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.32■□□□□ 0.84
ALFQ53S48 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.32■□□□□ 0.84
ALFQ53S48 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.32■□□□□ 0.84
ALFQ53S48 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.32■□□□□ 0.84
ALFQ53S48 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.32■□□□□ 0.84
ALFQ53S48 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALFQ53S48 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALFQ53S48 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALFQ53S48 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.31■□□□□ 0.84
ALFQ53S48 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALFQ53S48 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
ALFQ53S48 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
ALFQ53S48 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.31■□□□□ 0.84
ALFQ53S48 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ALFQ53S48 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ALFQ53S48 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALFQ53S48 AC133681.1-201ENST00000465482 601 ntBASIC20.31■□□□□ 0.84
ALFQ53S48 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.31■□□□□ 0.84
ALFQ53S48 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALFQ53S48 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.31■□□□□ 0.84
ALFQ53S48 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.31■□□□□ 0.84
ALFQ53S48 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.31■□□□□ 0.84
ALFQ53S48 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALFQ53S48 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALFQ53S48 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.31■□□□□ 0.84
ALFQ53S48 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ALFQ53S48 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALFQ53S48 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALFQ53S48 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALFQ53S48 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
ALFQ53S48 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
ALFQ53S48 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.3■□□□□ 0.84
ALFQ53S48 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.3■□□□□ 0.84
ALFQ53S48 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ALFQ53S48 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ALFQ53S48 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.3■□□□□ 0.84
ALFQ53S48 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.3■□□□□ 0.84
ALFQ53S48 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
ALFQ53S48 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ALFQ53S48 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.3■□□□□ 0.84
ALFQ53S48 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.3■□□□□ 0.84
ALFQ53S48 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ALFQ53S48 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.3■□□□□ 0.84
ALFQ53S48 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.3■□□□□ 0.84
ALFQ53S48 FAM197Y4-202ENST00000622692 608 ntBASIC20.3■□□□□ 0.84
ALFQ53S48 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.3■□□□□ 0.84
ALFQ53S48 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
ALFQ53S48 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms