Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LINC01554Q52M75 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01554Q52M75 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 BEX3-202ENST00000372634 753 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 AC019171.1-201ENST00000601251 1056 ntBASIC9.91□□□□□ -0.82
LINC01554Q52M75 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 AC144652.1-201ENST00000609974 1624 ntBASIC9.91□□□□□ -0.82
LINC01554Q52M75 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC01554Q52M75 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01554Q52M75 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
LINC01554Q52M75 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LINC01554Q52M75 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
LINC01554Q52M75 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC01554Q52M75 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
LINC01554Q52M75 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC01554Q52M75 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
LINC01554Q52M75 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 PCDHA1-201ENST00000378133 2726 ntBASIC9.9□□□□□ -0.82
LINC01554Q52M75 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 KRT18P24-201ENST00000344739 1156 ntBASIC9.9□□□□□ -0.82
LINC01554Q52M75 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 ATP5G2P3-201ENST00000429083 425 ntBASIC9.9□□□□□ -0.82
LINC01554Q52M75 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC01554Q52M75 AC063926.3-201ENST00000624734 5658 ntBASIC9.9□□□□□ -0.82
LINC01554Q52M75 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
LINC01554Q52M75 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
LINC01554Q52M75 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC01554Q52M75 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC01554Q52M75 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
LINC01554Q52M75 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
LINC01554Q52M75 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC01554Q52M75 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC01554Q52M75 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC9.9□□□□□ -0.83
LINC01554Q52M75 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC01554Q52M75 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01554Q52M75 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms