Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.83■□□□□ 0.93
PTPN20Q4JDL3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
PTPN20Q4JDL3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN20Q4JDL3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN20Q4JDL3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.83■□□□□ 0.92
PTPN20Q4JDL3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.83■□□□□ 0.92
PTPN20Q4JDL3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTPN20Q4JDL3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PTPN20Q4JDL3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 AP003097.1-201ENST00000530657 1135 ntBASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN20Q4JDL3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 AL121906.2-201ENST00000621597 723 ntBASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN20Q4JDL3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 POM121L13P-201ENST00000422362 380 ntBASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PTPN20Q4JDL3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms