Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRA2BP62995 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRA2BP62995 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRA2BP62995 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.66■□□□□ 0.58
TRA2BP62995 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRA2BP62995 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRA2BP62995 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRA2BP62995 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.66■□□□□ 0.58
TRA2BP62995 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRA2BP62995 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRA2BP62995 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRA2BP62995 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRA2BP62995 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.66■□□□□ 0.58
TRA2BP62995 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.66■□□□□ 0.58
TRA2BP62995 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRA2BP62995 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRA2BP62995 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRA2BP62995 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRA2BP62995 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRA2BP62995 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRA2BP62995 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRA2BP62995 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRA2BP62995 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRA2BP62995 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRA2BP62995 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRA2BP62995 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.65■□□□□ 0.58
TRA2BP62995 HLA-L-209ENST00000420110 1011 ntBASIC18.65■□□□□ 0.58
TRA2BP62995 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.65■□□□□ 0.58
TRA2BP62995 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.65■□□□□ 0.58
TRA2BP62995 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.65■□□□□ 0.58
TRA2BP62995 AL121906.2-201ENST00000621597 723 ntBASIC18.65■□□□□ 0.58
TRA2BP62995 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.65■□□□□ 0.58
TRA2BP62995 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.65■□□□□ 0.58
TRA2BP62995 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRA2BP62995 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRA2BP62995 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.65■□□□□ 0.58
TRA2BP62995 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRA2BP62995 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.65■□□□□ 0.58
TRA2BP62995 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRA2BP62995 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRA2BP62995 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.65■□□□□ 0.58
TRA2BP62995 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRA2BP62995 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.64■□□□□ 0.58
TRA2BP62995 AL158211.5-201ENST00000623583 2518 ntBASIC18.64■□□□□ 0.57
TRA2BP62995 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRA2BP62995 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRA2BP62995 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRA2BP62995 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.64■□□□□ 0.57
TRA2BP62995 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.64■□□□□ 0.57
TRA2BP62995 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRA2BP62995 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRA2BP62995 ID1-201ENST00000376105 1233 ntBASIC18.64■□□□□ 0.57
TRA2BP62995 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRA2BP62995 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.64■□□□□ 0.57
TRA2BP62995 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.64■□□□□ 0.57
TRA2BP62995 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.64■□□□□ 0.57
TRA2BP62995 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.64■□□□□ 0.57
TRA2BP62995 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRA2BP62995 AC120498.8-201ENST00000614275 531 ntBASIC18.64■□□□□ 0.57
TRA2BP62995 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.64■□□□□ 0.57
TRA2BP62995 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRA2BP62995 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.64■□□□□ 0.57
TRA2BP62995 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.64■□□□□ 0.57
TRA2BP62995 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRA2BP62995 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRA2BP62995 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRA2BP62995 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.64■□□□□ 0.57
TRA2BP62995 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.63■□□□□ 0.57
TRA2BP62995 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.63■□□□□ 0.57
TRA2BP62995 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.63■□□□□ 0.57
TRA2BP62995 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRA2BP62995 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
TRA2BP62995 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRA2BP62995 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 AL355802.2-201ENST00000402069 882 ntBASIC18.63■□□□□ 0.57
TRA2BP62995 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.63■□□□□ 0.57
TRA2BP62995 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRA2BP62995 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.63■□□□□ 0.57
TRA2BP62995 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.63■□□□□ 0.57
TRA2BP62995 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.63■□□□□ 0.57
TRA2BP62995 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.63■□□□□ 0.57
TRA2BP62995 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.63■□□□□ 0.57
TRA2BP62995 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRA2BP62995 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.63■□□□□ 0.57
TRA2BP62995 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms