Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL39P62891 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.95□□□□□ -0.18
RPL39P62891 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RPL39P62891 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.95□□□□□ -0.18
RPL39P62891 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RPL39P62891 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.95□□□□□ -0.18
RPL39P62891 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RPL39P62891 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.95□□□□□ -0.18
RPL39P62891 AP001330.3-201ENST00000520123 633 ntBASIC13.95□□□□□ -0.18
RPL39P62891 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.95□□□□□ -0.18
RPL39P62891 AL355001.2-201ENST00000620617 1191 ntBASIC13.95□□□□□ -0.18
RPL39P62891 AC005082.1-201ENST00000413042 2259 ntBASIC13.95□□□□□ -0.18
RPL39P62891 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
RPL39P62891 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RPL39P62891 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.95□□□□□ -0.18
RPL39P62891 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RPL39P62891 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL39P62891 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
RPL39P62891 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.94□□□□□ -0.18
RPL39P62891 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.94□□□□□ -0.18
RPL39P62891 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.94□□□□□ -0.18
RPL39P62891 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.94□□□□□ -0.18
RPL39P62891 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.94□□□□□ -0.18
RPL39P62891 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RPL39P62891 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RPL39P62891 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RPL39P62891 AC091799.1-201ENST00000422823 811 ntBASIC13.94□□□□□ -0.18
RPL39P62891 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.94□□□□□ -0.18
RPL39P62891 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
RPL39P62891 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.94□□□□□ -0.18
RPL39P62891 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RPL39P62891 AC009237.14-201ENST00000609975 1594 ntBASIC13.94□□□□□ -0.18
RPL39P62891 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.94□□□□□ -0.18
RPL39P62891 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPL39P62891 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.94□□□□□ -0.18
RPL39P62891 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.94□□□□□ -0.18
RPL39P62891 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RPL39P62891 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.93□□□□□ -0.18
RPL39P62891 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.93□□□□□ -0.18
RPL39P62891 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RPL39P62891 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.93□□□□□ -0.18
RPL39P62891 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
RPL39P62891 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
RPL39P62891 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.93□□□□□ -0.18
RPL39P62891 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RPL39P62891 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.93□□□□□ -0.18
RPL39P62891 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.93□□□□□ -0.18
RPL39P62891 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.93□□□□□ -0.18
RPL39P62891 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.93□□□□□ -0.18
RPL39P62891 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RPL39P62891 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms