Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 MIR935-201ENST00000401179 91 ntBASIC18.78■□□□□ 0.6
SH3BGRP55822 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.78■□□□□ 0.6
SH3BGRP55822 AC026271.2-201ENST00000428091 497 ntBASIC18.78■□□□□ 0.6
SH3BGRP55822 AC034268.1-201ENST00000441047 882 ntBASIC18.78■□□□□ 0.6
SH3BGRP55822 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.78■□□□□ 0.6
SH3BGRP55822 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.78■□□□□ 0.6
SH3BGRP55822 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.78■□□□□ 0.6
SH3BGRP55822 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.78■□□□□ 0.6
SH3BGRP55822 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
SH3BGRP55822 AC055733.4-201ENST00000638462 1354 ntBASIC18.78■□□□□ 0.6
SH3BGRP55822 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3BGRP55822 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SH3BGRP55822 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3BGRP55822 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3BGRP55822 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3BGRP55822 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.77■□□□□ 0.6
SH3BGRP55822 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3BGRP55822 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3BGRP55822 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SH3BGRP55822 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3BGRP55822 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3BGRP55822 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SH3BGRP55822 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SH3BGRP55822 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.77■□□□□ 0.6
SH3BGRP55822 AC079140.4-201ENST00000507448 529 ntBASIC18.77■□□□□ 0.6
SH3BGRP55822 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.77■□□□□ 0.6
SH3BGRP55822 KRT18P14-201ENST00000534205 1250 ntBASIC18.77■□□□□ 0.6
SH3BGRP55822 MIR5787-201ENST00000611784 55 ntBASIC18.77■□□□□ 0.6
SH3BGRP55822 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.77■□□□□ 0.6
SH3BGRP55822 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3BGRP55822 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SH3BGRP55822 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SH3BGRP55822 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SH3BGRP55822 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SH3BGRP55822 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SH3BGRP55822 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.77■□□□□ 0.59
SH3BGRP55822 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
SH3BGRP55822 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SH3BGRP55822 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SH3BGRP55822 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
SH3BGRP55822 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3BGRP55822 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3BGRP55822 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.76■□□□□ 0.59
SH3BGRP55822 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3BGRP55822 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.76■□□□□ 0.59
SH3BGRP55822 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3BGRP55822 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SH3BGRP55822 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.76■□□□□ 0.59
SH3BGRP55822 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SH3BGRP55822 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3BGRP55822 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3BGRP55822 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SH3BGRP55822 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SH3BGRP55822 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SH3BGRP55822 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.75■□□□□ 0.59
SH3BGRP55822 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SH3BGRP55822 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SH3BGRP55822 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3BGRP55822 AL390961.4-201ENST00000623958 2535 ntBASIC18.75■□□□□ 0.59
SH3BGRP55822 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.75■□□□□ 0.59
SH3BGRP55822 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.75■□□□□ 0.59
SH3BGRP55822 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3BGRP55822 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SH3BGRP55822 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3BGRP55822 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.75■□□□□ 0.59
SH3BGRP55822 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SH3BGRP55822 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.75■□□□□ 0.59
SH3BGRP55822 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.75■□□□□ 0.59
SH3BGRP55822 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SH3BGRP55822 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.75■□□□□ 0.59
SH3BGRP55822 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3BGRP55822 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.75■□□□□ 0.59
SH3BGRP55822 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3BGRP55822 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3BGRP55822 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3BGRP55822 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms