Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC4P55056 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOC4P55056 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
APOC4P55056 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC4P55056 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC4P55056 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC4P55056 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC4P55056 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC4P55056 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC4P55056 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
APOC4P55056 AL596275.1-201ENST00000423464 877 ntBASIC14.5□□□□□ -0.09
APOC4P55056 AP002982.1-201ENST00000492365 877 ntBASIC14.5□□□□□ -0.09
APOC4P55056 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.5□□□□□ -0.09
APOC4P55056 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
APOC4P55056 MIR4785-201ENST00000585005 73 ntBASIC14.5□□□□□ -0.09
APOC4P55056 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.5□□□□□ -0.09
APOC4P55056 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.5□□□□□ -0.09
APOC4P55056 Z99916.2-201ENST00000604037 246 ntBASIC14.5□□□□□ -0.09
APOC4P55056 AL049637.2-201ENST00000641778 930 ntBASIC14.5□□□□□ -0.09
APOC4P55056 PHGDH-210ENST00000641115 1638 ntBASIC14.5□□□□□ -0.09
APOC4P55056 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
APOC4P55056 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC4P55056 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
APOC4P55056 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC4P55056 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOC4P55056 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC4P55056 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC4P55056 HTR7P1-201ENST00000538670 1336 ntBASIC14.49□□□□□ -0.09
APOC4P55056 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC4P55056 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 AC116351.2-201ENST00000606540 1585 ntBASIC14.49□□□□□ -0.09
APOC4P55056 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
APOC4P55056 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
APOC4P55056 SNORA78-201ENST00000459373 127 ntBASIC14.49□□□□□ -0.09
APOC4P55056 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.49□□□□□ -0.09
APOC4P55056 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.49□□□□□ -0.09
APOC4P55056 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOC4P55056 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.49□□□□□ -0.09
APOC4P55056 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
APOC4P55056 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC4P55056 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.49□□□□□ -0.09
APOC4P55056 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC4P55056 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC4P55056 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
APOC4P55056 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
APOC4P55056 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APOC4P55056 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.48□□□□□ -0.09
APOC4P55056 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.48□□□□□ -0.09
APOC4P55056 YBX1P10-201ENST00000444752 975 ntBASIC14.48□□□□□ -0.09
APOC4P55056 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.48□□□□□ -0.09
APOC4P55056 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.48□□□□□ -0.09
APOC4P55056 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.48□□□□□ -0.09
APOC4P55056 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APOC4P55056 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.48□□□□□ -0.09
APOC4P55056 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.48□□□□□ -0.09
APOC4P55056 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
APOC4P55056 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.48□□□□□ -0.09
APOC4P55056 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.48□□□□□ -0.09
APOC4P55056 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.48□□□□□ -0.09
APOC4P55056 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC4P55056 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APOC4P55056 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC4P55056 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
APOC4P55056 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.47□□□□□ -0.09
APOC4P55056 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
APOC4P55056 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC4P55056 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC4P55056 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC4P55056 BCL2-203ENST00000589955 5011 ntBASIC14.47□□□□□ -0.09
APOC4P55056 AC018553.1-201ENST00000616682 1458 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms