Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC24.17■■□□□ 1.46
PDE1AP54750 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDE1AP54750 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC24.17■■□□□ 1.46
PDE1AP54750 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDE1AP54750 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.17■■□□□ 1.46
PDE1AP54750 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC24.17■■□□□ 1.46
PDE1AP54750 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
PDE1AP54750 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC24.16■■□□□ 1.46
PDE1AP54750 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.16■■□□□ 1.46
PDE1AP54750 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC24.16■■□□□ 1.46
PDE1AP54750 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.16■■□□□ 1.46
PDE1AP54750 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.16■■□□□ 1.46
PDE1AP54750 SOX15-203ENST00000570788 1093 ntBASIC24.16■■□□□ 1.46
PDE1AP54750 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.16■■□□□ 1.46
PDE1AP54750 AC120498.8-201ENST00000614275 531 ntBASIC24.16■■□□□ 1.46
PDE1AP54750 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.16■■□□□ 1.46
PDE1AP54750 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC24.16■■□□□ 1.46
PDE1AP54750 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.16■■□□□ 1.46
PDE1AP54750 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDE1AP54750 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PDE1AP54750 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PDE1AP54750 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.15■■□□□ 1.46
PDE1AP54750 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC24.15■■□□□ 1.46
PDE1AP54750 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDE1AP54750 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDE1AP54750 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDE1AP54750 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDE1AP54750 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC24.15■■□□□ 1.46
PDE1AP54750 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.15■■□□□ 1.46
PDE1AP54750 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDE1AP54750 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDE1AP54750 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDE1AP54750 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC24.15■■□□□ 1.46
PDE1AP54750 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDE1AP54750 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDE1AP54750 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC24.15■■□□□ 1.46
PDE1AP54750 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
PDE1AP54750 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC24.15■■□□□ 1.46
PDE1AP54750 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
PDE1AP54750 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PDE1AP54750 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
PDE1AP54750 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC24.14■■□□□ 1.46
PDE1AP54750 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDE1AP54750 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDE1AP54750 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDE1AP54750 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.14■■□□□ 1.45
PDE1AP54750 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC24.14■■□□□ 1.45
PDE1AP54750 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
PDE1AP54750 AC116562.4-201ENST00000641316 2276 ntBASIC24.14■■□□□ 1.45
PDE1AP54750 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDE1AP54750 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDE1AP54750 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDE1AP54750 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDE1AP54750 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PDE1AP54750 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
PDE1AP54750 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDE1AP54750 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.13■■□□□ 1.45
PDE1AP54750 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDE1AP54750 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDE1AP54750 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDE1AP54750 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDE1AP54750 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDE1AP54750 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDE1AP54750 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.13■■□□□ 1.45
PDE1AP54750 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.13■■□□□ 1.45
PDE1AP54750 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDE1AP54750 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.13■■□□□ 1.45
PDE1AP54750 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDE1AP54750 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC24.13■■□□□ 1.45
PDE1AP54750 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDE1AP54750 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDE1AP54750 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PDE1AP54750 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC24.12■■□□□ 1.45
PDE1AP54750 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE1AP54750 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE1AP54750 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
PDE1AP54750 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE1AP54750 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE1AP54750 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE1AP54750 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
PDE1AP54750 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.12■■□□□ 1.45
PDE1AP54750 ABHD17AP6-201ENST00000458502 1044 ntBASIC24.12■■□□□ 1.45
PDE1AP54750 UNC93B4-201ENST00000505679 747 ntBASIC24.12■■□□□ 1.45
PDE1AP54750 UNC93B5-201ENST00000530315 699 ntBASIC24.12■■□□□ 1.45
PDE1AP54750 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.12■■□□□ 1.45
PDE1AP54750 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE1AP54750 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDE1AP54750 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms