Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 KRT18P68-201ENST00000392293 1000 ntBASIC18.07■□□□□ 0.48
SLC9A3P48764 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC9A3P48764 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC9A3P48764 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.07■□□□□ 0.48
SLC9A3P48764 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC9A3P48764 AC069236.1-201ENST00000604339 616 ntBASIC18.07■□□□□ 0.48
SLC9A3P48764 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC9A3P48764 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC9A3P48764 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
SLC9A3P48764 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
SLC9A3P48764 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC9A3P48764 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC9A3P48764 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC9A3P48764 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC9A3P48764 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC9A3P48764 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC9A3P48764 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC9A3P48764 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SLC9A3P48764 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SLC9A3P48764 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.06■□□□□ 0.48
SLC9A3P48764 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC9A3P48764 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC9A3P48764 AC011767.1-201ENST00000617410 1153 ntBASIC18.06■□□□□ 0.48
SLC9A3P48764 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC9A3P48764 AC231657.2-201ENST00000624556 255 ntBASIC18.06■□□□□ 0.48
SLC9A3P48764 AC008694.1-202ENST00000636953 945 ntBASIC18.06■□□□□ 0.48
SLC9A3P48764 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC9A3P48764 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC9A3P48764 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC9A3P48764 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC9A3P48764 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SLC9A3P48764 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SLC9A3P48764 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SLC9A3P48764 AL031963.3-201ENST00000606441 850 ntBASIC18.05■□□□□ 0.48
SLC9A3P48764 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC9A3P48764 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SLC9A3P48764 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 KRT8P20-201ENST00000423953 1409 ntBASIC18.05■□□□□ 0.48
SLC9A3P48764 KRT16P6-202ENST00000425692 1426 ntBASIC18.05■□□□□ 0.48
SLC9A3P48764 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC9A3P48764 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SLC9A3P48764 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC9A3P48764 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC9A3P48764 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC9A3P48764 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC9A3P48764 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SLC9A3P48764 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC9A3P48764 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC9A3P48764 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC9A3P48764 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC9A3P48764 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC9A3P48764 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC9A3P48764 BID-214ENST00000617586 542 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC9A3P48764 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SLC9A3P48764 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC9A3P48764 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SLC9A3P48764 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
SLC9A3P48764 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC9A3P48764 AC009237.14-201ENST00000609975 1594 ntBASIC18.04■□□□□ 0.48
SLC9A3P48764 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC9A3P48764 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC9A3P48764 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC9A3P48764 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC9A3P48764 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC9A3P48764 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC9A3P48764 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC9A3P48764 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC9A3P48764 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC9A3P48764 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC9A3P48764 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC9A3P48764 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC9A3P48764 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC9A3P48764 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC9A3P48764 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLC9A3P48764 AC026271.2-201ENST00000428091 497 ntBASIC18.03■□□□□ 0.48
SLC9A3P48764 CYP2T1P-201ENST00000432607 1285 ntBASIC18.03■□□□□ 0.48
SLC9A3P48764 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms