Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM23P36406 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TRIM23P36406 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM23P36406 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRIM23P36406 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM23P36406 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM23P36406 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TRIM23P36406 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM23P36406 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRIM23P36406 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM23P36406 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM23P36406 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM23P36406 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
TRIM23P36406 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM23P36406 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
TRIM23P36406 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRIM23P36406 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM23P36406 KRT18P16-201ENST00000510337 1294 ntBASIC19.48■□□□□ 0.71
TRIM23P36406 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM23P36406 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM23P36406 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.48■□□□□ 0.71
TRIM23P36406 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.48■□□□□ 0.71
TRIM23P36406 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM23P36406 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRIM23P36406 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM23P36406 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM23P36406 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM23P36406 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM23P36406 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM23P36406 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM23P36406 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRIM23P36406 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM23P36406 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM23P36406 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM23P36406 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM23P36406 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM23P36406 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM23P36406 MIR4785-201ENST00000585005 73 ntBASIC19.47■□□□□ 0.71
TRIM23P36406 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM23P36406 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM23P36406 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM23P36406 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM23P36406 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM23P36406 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
TRIM23P36406 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM23P36406 AP001271.2-201ENST00000624018 1556 ntBASIC19.46■□□□□ 0.71
TRIM23P36406 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM23P36406 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM23P36406 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM23P36406 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM23P36406 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM23P36406 CD177P1-201ENST00000606252 935 ntBASIC19.46■□□□□ 0.71
TRIM23P36406 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM23P36406 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRIM23P36406 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM23P36406 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM23P36406 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM23P36406 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM23P36406 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM23P36406 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM23P36406 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM23P36406 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM23P36406 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRIM23P36406 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM23P36406 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRIM23P36406 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM23P36406 AP002982.1-201ENST00000492365 877 ntBASIC19.45■□□□□ 0.7
TRIM23P36406 C1QL1P1-201ENST00000568105 661 ntBASIC19.45■□□□□ 0.7
TRIM23P36406 AC092667.1-201ENST00000434301 2586 ntBASIC19.45■□□□□ 0.7
TRIM23P36406 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM23P36406 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM23P36406 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TRIM23P36406 AL691432.2-201ENST00000607222 2038 ntBASIC19.44■□□□□ 0.7
TRIM23P36406 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM23P36406 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM23P36406 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.44■□□□□ 0.7
TRIM23P36406 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM23P36406 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM23P36406 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM23P36406 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM23P36406 NIFKP9-201ENST00000419265 221 ntBASIC19.44■□□□□ 0.7
TRIM23P36406 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM23P36406 TUBB8P6-201ENST00000436895 1288 ntBASIC19.44■□□□□ 0.7
TRIM23P36406 KSR1P1-201ENST00000446298 240 ntBASIC19.44■□□□□ 0.7
TRIM23P36406 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.44■□□□□ 0.7
TRIM23P36406 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM23P36406 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM23P36406 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms