Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.81■□□□□ 0.92
RFC1P35251 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.81■□□□□ 0.92
RFC1P35251 AL390719.1-204ENST00000412397 1219 ntBASIC20.81■□□□□ 0.92
RFC1P35251 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.81■□□□□ 0.92
RFC1P35251 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.81■□□□□ 0.92
RFC1P35251 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
RFC1P35251 AC006557.6-201ENST00000623071 864 ntBASIC20.81■□□□□ 0.92
RFC1P35251 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.8■□□□□ 0.92
RFC1P35251 AC092368.3-202ENST00000574180 1591 ntBASIC20.8■□□□□ 0.92
RFC1P35251 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RFC1P35251 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RFC1P35251 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.8■□□□□ 0.92
RFC1P35251 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.8■□□□□ 0.92
RFC1P35251 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
RFC1P35251 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC1P35251 AP001271.2-201ENST00000624018 1556 ntBASIC20.8■□□□□ 0.92
RFC1P35251 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.8■□□□□ 0.92
RFC1P35251 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.79■□□□□ 0.92
RFC1P35251 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC1P35251 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFC1P35251 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.79■□□□□ 0.92
RFC1P35251 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFC1P35251 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RFC1P35251 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC1P35251 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC1P35251 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RFC1P35251 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.79■□□□□ 0.92
RFC1P35251 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.79■□□□□ 0.92
RFC1P35251 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RFC1P35251 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFC1P35251 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.79■□□□□ 0.92
RFC1P35251 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.79■□□□□ 0.92
RFC1P35251 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFC1P35251 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.79■□□□□ 0.92
RFC1P35251 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RFC1P35251 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC1P35251 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC1P35251 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC1P35251 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFC1P35251 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RFC1P35251 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.79■□□□□ 0.92
RFC1P35251 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC1P35251 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RFC1P35251 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.78■□□□□ 0.92
RFC1P35251 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC1P35251 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RFC1P35251 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RFC1P35251 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC1P35251 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.78■□□□□ 0.92
RFC1P35251 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFC1P35251 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RFC1P35251 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC1P35251 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.78■□□□□ 0.92
RFC1P35251 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC1P35251 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.78■□□□□ 0.92
RFC1P35251 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.78■□□□□ 0.92
RFC1P35251 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.78■□□□□ 0.92
RFC1P35251 PNMA6B-201ENST00000538162 1200 ntBASIC20.78■□□□□ 0.92
RFC1P35251 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.78■□□□□ 0.92
RFC1P35251 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.78■□□□□ 0.92
RFC1P35251 AC060766.5-201ENST00000590539 871 ntBASIC20.78■□□□□ 0.92
RFC1P35251 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC1P35251 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC1P35251 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC1P35251 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.78■□□□□ 0.92
RFC1P35251 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC1P35251 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.78■□□□□ 0.92
RFC1P35251 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.78■□□□□ 0.92
RFC1P35251 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC1P35251 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RFC1P35251 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC1P35251 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms