Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19■□□□□ 0.63
CCKBRP32239 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCKBRP32239 KRT8P9-201ENST00000558927 1449 ntBASIC19■□□□□ 0.63
CCKBRP32239 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.99■□□□□ 0.63
CCKBRP32239 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCKBRP32239 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.99■□□□□ 0.63
CCKBRP32239 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.99■□□□□ 0.63
CCKBRP32239 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.99■□□□□ 0.63
CCKBRP32239 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.99■□□□□ 0.63
CCKBRP32239 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.99■□□□□ 0.63
CCKBRP32239 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCKBRP32239 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCKBRP32239 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.99■□□□□ 0.63
CCKBRP32239 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCKBRP32239 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCKBRP32239 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCKBRP32239 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCKBRP32239 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCKBRP32239 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCKBRP32239 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCKBRP32239 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCKBRP32239 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.98■□□□□ 0.63
CCKBRP32239 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCKBRP32239 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCKBRP32239 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCKBRP32239 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCKBRP32239 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.98■□□□□ 0.63
CCKBRP32239 NAPSB-206ENST00000562112 1266 ntBASIC18.98■□□□□ 0.63
CCKBRP32239 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.98■□□□□ 0.63
CCKBRP32239 AL445228.2-201ENST00000605589 952 ntBASIC18.98■□□□□ 0.63
CCKBRP32239 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CCKBRP32239 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCKBRP32239 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCKBRP32239 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCKBRP32239 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCKBRP32239 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.97■□□□□ 0.63
CCKBRP32239 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCKBRP32239 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.97■□□□□ 0.63
CCKBRP32239 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCKBRP32239 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.97■□□□□ 0.63
CCKBRP32239 LINC01568-207ENST00000641790 1380 ntBASIC18.97■□□□□ 0.63
CCKBRP32239 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCKBRP32239 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.97■□□□□ 0.63
CCKBRP32239 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCKBRP32239 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCKBRP32239 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCKBRP32239 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CCKBRP32239 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCKBRP32239 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.97■□□□□ 0.63
CCKBRP32239 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
CCKBRP32239 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.97■□□□□ 0.63
CCKBRP32239 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCKBRP32239 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCKBRP32239 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.97■□□□□ 0.63
CCKBRP32239 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.97■□□□□ 0.63
CCKBRP32239 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.97■□□□□ 0.63
CCKBRP32239 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCKBRP32239 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCKBRP32239 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.97■□□□□ 0.63
CCKBRP32239 FEM1AP4-201ENST00000443167 1987 ntBASIC18.97■□□□□ 0.63
CCKBRP32239 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.97■□□□□ 0.63
CCKBRP32239 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCKBRP32239 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CCKBRP32239 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCKBRP32239 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.96■□□□□ 0.63
CCKBRP32239 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.96■□□□□ 0.63
CCKBRP32239 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.96■□□□□ 0.63
CCKBRP32239 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCKBRP32239 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.96■□□□□ 0.63
CCKBRP32239 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCKBRP32239 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.96■□□□□ 0.63
CCKBRP32239 AC113347.1-201ENST00000413321 391 ntBASIC18.96■□□□□ 0.63
CCKBRP32239 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.96■□□□□ 0.63
CCKBRP32239 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.96■□□□□ 0.63
CCKBRP32239 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.96■□□□□ 0.63
CCKBRP32239 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.96■□□□□ 0.63
CCKBRP32239 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.96■□□□□ 0.63
CCKBRP32239 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.96■□□□□ 0.63
CCKBRP32239 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCKBRP32239 C1QL1P1-201ENST00000568105 661 ntBASIC18.96■□□□□ 0.63
CCKBRP32239 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCKBRP32239 AL590326.2-201ENST00000625139 305 ntBASIC18.96■□□□□ 0.63
CCKBRP32239 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCKBRP32239 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCKBRP32239 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCKBRP32239 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCKBRP32239 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCKBRP32239 KRT18P22-201ENST00000402024 1347 ntBASIC18.96■□□□□ 0.63
CCKBRP32239 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.96■□□□□ 0.63
CCKBRP32239 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCKBRP32239 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.96■□□□□ 0.63
CCKBRP32239 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCKBRP32239 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCKBRP32239 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCKBRP32239 AL121603.2-201ENST00000557373 2117 ntBASIC18.95■□□□□ 0.62
CCKBRP32239 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 AP006587.1-201ENST00000534129 1502 ntBASIC18.95■□□□□ 0.62
CCKBRP32239 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.95■□□□□ 0.62
CCKBRP32239 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms