Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.27■□□□□ 0.52
LCN1P31025 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCN1P31025 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LCN1P31025 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.27■□□□□ 0.52
LCN1P31025 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.27■□□□□ 0.52
LCN1P31025 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LCN1P31025 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.27■□□□□ 0.52
LCN1P31025 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCN1P31025 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCN1P31025 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCN1P31025 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LCN1P31025 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LCN1P31025 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCN1P31025 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
LCN1P31025 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
LCN1P31025 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
LCN1P31025 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LCN1P31025 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.26■□□□□ 0.51
LCN1P31025 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.26■□□□□ 0.51
LCN1P31025 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LCN1P31025 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.26■□□□□ 0.51
LCN1P31025 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.26■□□□□ 0.51
LCN1P31025 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.26■□□□□ 0.51
LCN1P31025 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LCN1P31025 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.26■□□□□ 0.51
LCN1P31025 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.26■□□□□ 0.51
LCN1P31025 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.26■□□□□ 0.51
LCN1P31025 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LCN1P31025 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 AL691432.2-201ENST00000607222 2038 ntBASIC18.26■□□□□ 0.51
LCN1P31025 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LCN1P31025 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.26■□□□□ 0.51
LCN1P31025 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LCN1P31025 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCN1P31025 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P31025 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P31025 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P31025 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P31025 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LCN1P31025 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.25■□□□□ 0.51
LCN1P31025 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.25■□□□□ 0.51
LCN1P31025 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.25■□□□□ 0.51
LCN1P31025 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.25■□□□□ 0.51
LCN1P31025 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.25■□□□□ 0.51
LCN1P31025 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P31025 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCN1P31025 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.25■□□□□ 0.51
LCN1P31025 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.25■□□□□ 0.51
LCN1P31025 AC116351.2-201ENST00000606540 1585 ntBASIC18.25■□□□□ 0.51
LCN1P31025 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
LCN1P31025 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LCN1P31025 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.25■□□□□ 0.51
LCN1P31025 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.24■□□□□ 0.51
LCN1P31025 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P31025 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.24■□□□□ 0.51
LCN1P31025 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.24■□□□□ 0.51
LCN1P31025 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P31025 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.24■□□□□ 0.51
LCN1P31025 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LCN1P31025 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P31025 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P31025 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P31025 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P31025 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.24■□□□□ 0.51
LCN1P31025 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P31025 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
LCN1P31025 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P31025 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LCN1P31025 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCN1P31025 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P31025 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.23■□□□□ 0.51
LCN1P31025 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P31025 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P31025 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P31025 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P31025 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P31025 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P31025 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.23■□□□□ 0.51
LCN1P31025 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P31025 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.23■□□□□ 0.51
LCN1P31025 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P31025 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCN1P31025 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.23■□□□□ 0.51
LCN1P31025 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.23■□□□□ 0.51
LCN1P31025 AC120498.8-201ENST00000614275 531 ntBASIC18.23■□□□□ 0.51
LCN1P31025 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.23■□□□□ 0.51
LCN1P31025 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.23■□□□□ 0.51
LCN1P31025 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms