Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAMA1P25391 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAMA1P25391 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAMA1P25391 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAMA1P25391 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.44■□□□□ 0.7
LAMA1P25391 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LAMA1P25391 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAMA1P25391 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
LAMA1P25391 LINC01465-201ENST00000408887 1940 ntBASIC19.44■□□□□ 0.7
LAMA1P25391 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA1P25391 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA1P25391 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.43■□□□□ 0.7
LAMA1P25391 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.43■□□□□ 0.7
LAMA1P25391 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA1P25391 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA1P25391 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA1P25391 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LAMA1P25391 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA1P25391 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
LAMA1P25391 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.43■□□□□ 0.7
LAMA1P25391 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA1P25391 AL450487.1-201ENST00000426799 995 ntBASIC19.43■□□□□ 0.7
LAMA1P25391 AC117947.1-201ENST00000427448 529 ntBASIC19.43■□□□□ 0.7
LAMA1P25391 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
LAMA1P25391 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
LAMA1P25391 LINC01238-205ENST00000567549 1107 ntBASIC19.43■□□□□ 0.7
LAMA1P25391 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.43■□□□□ 0.7
LAMA1P25391 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LAMA1P25391 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.43■□□□□ 0.7
LAMA1P25391 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA1P25391 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LAMA1P25391 TSPY5P-201ENST00000426936 936 ntBASIC19.43■□□□□ 0.7
LAMA1P25391 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.43■□□□□ 0.7
LAMA1P25391 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA1P25391 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LAMA1P25391 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.42■□□□□ 0.7
LAMA1P25391 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA1P25391 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.42■□□□□ 0.7
LAMA1P25391 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA1P25391 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA1P25391 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA1P25391 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.42■□□□□ 0.7
LAMA1P25391 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.42■□□□□ 0.7
LAMA1P25391 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA1P25391 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.42■□□□□ 0.7
LAMA1P25391 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAMA1P25391 FEM1AP4-201ENST00000443167 1987 ntBASIC19.41■□□□□ 0.7
LAMA1P25391 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.41■□□□□ 0.7
LAMA1P25391 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAMA1P25391 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.41■□□□□ 0.7
LAMA1P25391 AC011506.1-201ENST00000474329 610 ntBASIC19.41■□□□□ 0.7
LAMA1P25391 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.41■□□□□ 0.7
LAMA1P25391 FAM86EP-206ENST00000510506 987 ntBASIC19.41■□□□□ 0.7
LAMA1P25391 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.41■□□□□ 0.7
LAMA1P25391 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LAMA1P25391 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LAMA1P25391 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.41■□□□□ 0.7
LAMA1P25391 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.41■□□□□ 0.7
LAMA1P25391 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LAMA1P25391 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.41■□□□□ 0.7
LAMA1P25391 AC130371.2-201ENST00000619443 611 ntBASIC19.41■□□□□ 0.7
LAMA1P25391 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LAMA1P25391 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA1P25391 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.4■□□□□ 0.7
LAMA1P25391 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LAMA1P25391 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA1P25391 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LAMA1P25391 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LAMA1P25391 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA1P25391 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.4■□□□□ 0.7
LAMA1P25391 AC011558.1-201ENST00000623459 338 ntBASIC19.4■□□□□ 0.7
LAMA1P25391 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.4■□□□□ 0.7
LAMA1P25391 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.4■□□□□ 0.7
LAMA1P25391 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA1P25391 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA1P25391 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA1P25391 FP700111.2-201ENST00000619190 1892 ntBASIC19.4■□□□□ 0.7
LAMA1P25391 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.4■□□□□ 0.7
LAMA1P25391 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LAMA1P25391 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA1P25391 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA1P25391 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA1P25391 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LAMA1P25391 RNF152P1-201ENST00000397754 604 ntBASIC19.4■□□□□ 0.7
LAMA1P25391 C1QL1P1-201ENST00000568105 661 ntBASIC19.4■□□□□ 0.7
LAMA1P25391 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA1P25391 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA1P25391 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA1P25391 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
LAMA1P25391 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LAMA1P25391 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LAMA1P25391 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LAMA1P25391 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LAMA1P25391 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LAMA1P25391 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.39■□□□□ 0.69
LAMA1P25391 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.39■□□□□ 0.69
LAMA1P25391 MIR2861-201ENST00000636310 90 ntBASIC19.39■□□□□ 0.69
LAMA1P25391 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LAMA1P25391 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
LAMA1P25391 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms