Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.11■□□□□ 0.81
NFKB1P19838 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NFKB1P19838 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.11■□□□□ 0.81
NFKB1P19838 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NFKB1P19838 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.11■□□□□ 0.81
NFKB1P19838 AC124283.5-201ENST00000624661 1809 ntBASIC20.11■□□□□ 0.81
NFKB1P19838 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NFKB1P19838 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
NFKB1P19838 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.1■□□□□ 0.81
NFKB1P19838 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NFKB1P19838 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.1■□□□□ 0.81
NFKB1P19838 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.1■□□□□ 0.81
NFKB1P19838 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.1■□□□□ 0.81
NFKB1P19838 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.1■□□□□ 0.81
NFKB1P19838 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
NFKB1P19838 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NFKB1P19838 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NFKB1P19838 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NFKB1P19838 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NFKB1P19838 AC116351.2-201ENST00000606540 1585 ntBASIC20.09■□□□□ 0.81
NFKB1P19838 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NFKB1P19838 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NFKB1P19838 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NFKB1P19838 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.09■□□□□ 0.81
NFKB1P19838 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.09■□□□□ 0.81
NFKB1P19838 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.09■□□□□ 0.81
NFKB1P19838 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.09■□□□□ 0.81
NFKB1P19838 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.09■□□□□ 0.81
NFKB1P19838 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.09■□□□□ 0.81
NFKB1P19838 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.09■□□□□ 0.81
NFKB1P19838 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NFKB1P19838 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.09■□□□□ 0.81
NFKB1P19838 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NFKB1P19838 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.09■□□□□ 0.81
NFKB1P19838 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NFKB1P19838 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.09■□□□□ 0.81
NFKB1P19838 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.09■□□□□ 0.81
NFKB1P19838 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
NFKB1P19838 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NFKB1P19838 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.08■□□□□ 0.81
NFKB1P19838 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NFKB1P19838 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NFKB1P19838 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NFKB1P19838 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
NFKB1P19838 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NFKB1P19838 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NFKB1P19838 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NFKB1P19838 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NFKB1P19838 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.08■□□□□ 0.81
NFKB1P19838 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.08■□□□□ 0.81
NFKB1P19838 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.08■□□□□ 0.81
NFKB1P19838 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NFKB1P19838 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NFKB1P19838 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NFKB1P19838 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NFKB1P19838 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
NFKB1P19838 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.07■□□□□ 0.8
NFKB1P19838 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.07■□□□□ 0.8
NFKB1P19838 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.07■□□□□ 0.8
NFKB1P19838 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NFKB1P19838 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NFKB1P19838 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
NFKB1P19838 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NFKB1P19838 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.07■□□□□ 0.8
NFKB1P19838 RPS2P52-201ENST00000469610 820 ntBASIC20.07■□□□□ 0.8
NFKB1P19838 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.07■□□□□ 0.8
NFKB1P19838 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.07■□□□□ 0.8
NFKB1P19838 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.07■□□□□ 0.8
NFKB1P19838 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.07■□□□□ 0.8
NFKB1P19838 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.07■□□□□ 0.8
NFKB1P19838 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NFKB1P19838 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NFKB1P19838 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NFKB1P19838 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NFKB1P19838 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NFKB1P19838 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NFKB1P19838 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NFKB1P19838 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NFKB1P19838 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.06■□□□□ 0.8
NFKB1P19838 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NFKB1P19838 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.06■□□□□ 0.8
NFKB1P19838 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NFKB1P19838 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NFKB1P19838 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NFKB1P19838 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NFKB1P19838 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.06■□□□□ 0.8
NFKB1P19838 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NFKB1P19838 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms