Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATF1P18846 AC034268.1-201ENST00000441047 882 ntBASIC17.33■□□□□ 0.36
ATF1P18846 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.33■□□□□ 0.36
ATF1P18846 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.33■□□□□ 0.36
ATF1P18846 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.33■□□□□ 0.36
ATF1P18846 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.33■□□□□ 0.36
ATF1P18846 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATF1P18846 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.33■□□□□ 0.36
ATF1P18846 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATF1P18846 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
ATF1P18846 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATF1P18846 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATF1P18846 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATF1P18846 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.32■□□□□ 0.36
ATF1P18846 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ATF1P18846 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATF1P18846 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATF1P18846 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATF1P18846 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.32■□□□□ 0.36
ATF1P18846 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.32■□□□□ 0.36
ATF1P18846 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATF1P18846 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATF1P18846 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
ATF1P18846 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATF1P18846 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ATF1P18846 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.32■□□□□ 0.36
ATF1P18846 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.32■□□□□ 0.36
ATF1P18846 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.32■□□□□ 0.36
ATF1P18846 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.32■□□□□ 0.36
ATF1P18846 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATF1P18846 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATF1P18846 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATF1P18846 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATF1P18846 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ATF1P18846 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.31■□□□□ 0.36
ATF1P18846 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.31■□□□□ 0.36
ATF1P18846 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.31■□□□□ 0.36
ATF1P18846 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ATF1P18846 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ATF1P18846 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.31■□□□□ 0.36
ATF1P18846 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.31■□□□□ 0.36
ATF1P18846 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.31■□□□□ 0.36
ATF1P18846 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATF1P18846 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.31■□□□□ 0.36
ATF1P18846 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ATF1P18846 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.31■□□□□ 0.36
ATF1P18846 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.31■□□□□ 0.36
ATF1P18846 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.31■□□□□ 0.36
ATF1P18846 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
ATF1P18846 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ATF1P18846 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATF1P18846 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.3■□□□□ 0.36
ATF1P18846 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ATF1P18846 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.3■□□□□ 0.36
ATF1P18846 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.3■□□□□ 0.36
ATF1P18846 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.3■□□□□ 0.36
ATF1P18846 LINC01465-201ENST00000408887 1940 ntBASIC17.3■□□□□ 0.36
ATF1P18846 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ATF1P18846 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ATF1P18846 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.3■□□□□ 0.36
ATF1P18846 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.3■□□□□ 0.36
ATF1P18846 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.3■□□□□ 0.36
ATF1P18846 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.3■□□□□ 0.36
ATF1P18846 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
ATF1P18846 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 CYP21A1P-202ENST00000354927 1481 ntBASIC17.3■□□□□ 0.36
ATF1P18846 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATF1P18846 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms