Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
BMP4P12644 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.07■□□□□ 0.48
BMP4P12644 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BMP4P12644 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
BMP4P12644 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BMP4P12644 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BMP4P12644 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BMP4P12644 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.07■□□□□ 0.48
BMP4P12644 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
BMP4P12644 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.06■□□□□ 0.48
BMP4P12644 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
BMP4P12644 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.06■□□□□ 0.48
BMP4P12644 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.06■□□□□ 0.48
BMP4P12644 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.06■□□□□ 0.48
BMP4P12644 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
BMP4P12644 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.06■□□□□ 0.48
BMP4P12644 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BMP4P12644 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BMP4P12644 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
BMP4P12644 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BMP4P12644 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.05■□□□□ 0.48
BMP4P12644 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.05■□□□□ 0.48
BMP4P12644 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BMP4P12644 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.05■□□□□ 0.48
BMP4P12644 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BMP4P12644 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BMP4P12644 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BMP4P12644 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BMP4P12644 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BMP4P12644 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BMP4P12644 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.05■□□□□ 0.48
BMP4P12644 AC083906.2-201ENST00000511578 360 ntBASIC18.05■□□□□ 0.48
BMP4P12644 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.05■□□□□ 0.48
BMP4P12644 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.05■□□□□ 0.48
BMP4P12644 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.05■□□□□ 0.48
BMP4P12644 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.05■□□□□ 0.48
BMP4P12644 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.05■□□□□ 0.48
BMP4P12644 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.05■□□□□ 0.48
BMP4P12644 AC008694.1-202ENST00000636953 945 ntBASIC18.05■□□□□ 0.48
BMP4P12644 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BMP4P12644 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BMP4P12644 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BMP4P12644 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BMP4P12644 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.04■□□□□ 0.48
BMP4P12644 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.04■□□□□ 0.48
BMP4P12644 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BMP4P12644 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.04■□□□□ 0.48
BMP4P12644 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BMP4P12644 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BMP4P12644 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
BMP4P12644 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BMP4P12644 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BMP4P12644 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BMP4P12644 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.04■□□□□ 0.48
BMP4P12644 TERF1P5-201ENST00000477545 1207 ntBASIC18.04■□□□□ 0.48
BMP4P12644 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.04■□□□□ 0.48
BMP4P12644 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.04■□□□□ 0.48
BMP4P12644 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BMP4P12644 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
BMP4P12644 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BMP4P12644 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BMP4P12644 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.04■□□□□ 0.48
BMP4P12644 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BMP4P12644 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
BMP4P12644 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BMP4P12644 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BMP4P12644 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BMP4P12644 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.03■□□□□ 0.48
BMP4P12644 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
BMP4P12644 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BMP4P12644 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BMP4P12644 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.03■□□□□ 0.48
BMP4P12644 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.03■□□□□ 0.48
BMP4P12644 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BMP4P12644 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
BMP4P12644 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.03■□□□□ 0.48
BMP4P12644 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.03■□□□□ 0.48
BMP4P12644 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.03■□□□□ 0.48
BMP4P12644 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BMP4P12644 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BMP4P12644 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.03■□□□□ 0.48
BMP4P12644 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BMP4P12644 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BMP4P12644 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
BMP4P12644 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BMP4P12644 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
BMP4P12644 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms