Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CSB-PGBD3P0DP91 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
CSB-PGBD3P0DP91 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CSB-PGBD3P0DP91 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CSB-PGBD3P0DP91 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CSB-PGBD3P0DP91 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CSB-PGBD3P0DP91 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CSB-PGBD3P0DP91 AP000692.2-201ENST00000608391 879 ntBASIC26.27■■□□□ 1.8
CSB-PGBD3P0DP91 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CSB-PGBD3P0DP91 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CSB-PGBD3P0DP91 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CSB-PGBD3P0DP91 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CSB-PGBD3P0DP91 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 GOLGA6L3-201ENST00000507199 1679 ntBASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 RCC2P6-201ENST00000526625 1557 ntBASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 HMGA1P5-201ENST00000412453 271 ntBASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 AC139887.4-201ENST00000607877 719 ntBASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 AC091076.1-201ENST00000610741 619 ntBASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CSB-PGBD3P0DP91 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC26.25■■□□□ 1.79
CSB-PGBD3P0DP91 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CSB-PGBD3P0DP91 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CSB-PGBD3P0DP91 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC26.25■■□□□ 1.79
CSB-PGBD3P0DP91 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC26.25■■□□□ 1.79
CSB-PGBD3P0DP91 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CSB-PGBD3P0DP91 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC26.25■■□□□ 1.79
CSB-PGBD3P0DP91 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CSB-PGBD3P0DP91 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CSB-PGBD3P0DP91 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC26.25■■□□□ 1.79
CSB-PGBD3P0DP91 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC26.25■■□□□ 1.79
CSB-PGBD3P0DP91 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CSB-PGBD3P0DP91 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 BID-212ENST00000614949 1988 ntTSL 5 BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 AC008040.2-201ENST00000461049 708 ntBASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSB-PGBD3P0DP91 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 AC116562.4-202ENST00000641738 218 ntBASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 FEM1AP4-201ENST00000443167 1987 ntBASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 AL117328.2-201ENST00000624617 1940 ntBASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC26.23■■□□□ 1.79
CSB-PGBD3P0DP91 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 MFAP1P1-201ENST00000442257 1255 ntBASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 NMU-205ENST00000511469 756 ntTSL 3 BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CSB-PGBD3P0DP91 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms