Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC243732.1-201ENST00000612648 864 ntBASIC22.12■■□□□ 1.13
TPM3P06753 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
TPM3P06753 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
TPM3P06753 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
TPM3P06753 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
TPM3P06753 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TPM3P06753 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TPM3P06753 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.11■■□□□ 1.13
TPM3P06753 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
TPM3P06753 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TPM3P06753 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TPM3P06753 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TPM3P06753 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TPM3P06753 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
TPM3P06753 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TPM3P06753 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
TPM3P06753 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.11■■□□□ 1.13
TPM3P06753 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.11■■□□□ 1.13
TPM3P06753 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.11■■□□□ 1.13
TPM3P06753 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TPM3P06753 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TPM3P06753 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TPM3P06753 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TPM3P06753 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.11■■□□□ 1.13
TPM3P06753 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TPM3P06753 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TPM3P06753 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
TPM3P06753 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TPM3P06753 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TPM3P06753 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TPM3P06753 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.1■■□□□ 1.13
TPM3P06753 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
TPM3P06753 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
TPM3P06753 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TPM3P06753 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.1■■□□□ 1.13
TPM3P06753 AP001160.3-201ENST00000601484 763 ntBASIC22.1■■□□□ 1.13
TPM3P06753 MIR6084-201ENST00000622012 110 ntBASIC22.1■■□□□ 1.13
TPM3P06753 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.1■■□□□ 1.13
TPM3P06753 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TPM3P06753 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.1■■□□□ 1.13
TPM3P06753 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.09■■□□□ 1.13
TPM3P06753 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
TPM3P06753 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
TPM3P06753 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
TPM3P06753 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
TPM3P06753 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 PGM5P4-201ENST00000421970 445 ntBASIC22.09■■□□□ 1.13
TPM3P06753 AC091799.1-201ENST00000422823 811 ntBASIC22.09■■□□□ 1.13
TPM3P06753 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
TPM3P06753 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
TPM3P06753 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
TPM3P06753 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 AL032819.2-201ENST00000624543 2162 ntBASIC22.09■■□□□ 1.13
TPM3P06753 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.09■■□□□ 1.13
TPM3P06753 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC22.09■■□□□ 1.13
TPM3P06753 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.09■■□□□ 1.13
TPM3P06753 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
TPM3P06753 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TPM3P06753 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.09■■□□□ 1.13
TPM3P06753 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
TPM3P06753 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.08■■□□□ 1.13
TPM3P06753 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TPM3P06753 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TPM3P06753 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
TPM3P06753 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
TPM3P06753 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.13
TPM3P06753 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
TPM3P06753 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TPM3P06753 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TPM3P06753 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.08■■□□□ 1.13
TPM3P06753 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TPM3P06753 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.08■■□□□ 1.13
TPM3P06753 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.08■■□□□ 1.13
TPM3P06753 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TPM3P06753 AC104187.1-201ENST00000607510 612 ntBASIC22.08■■□□□ 1.13
TPM3P06753 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
TPM3P06753 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.08■■□□□ 1.13
TPM3P06753 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TPM3P06753 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.08■■□□□ 1.13
TPM3P06753 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.08■■□□□ 1.12
TPM3P06753 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
TPM3P06753 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.12
TPM3P06753 AL049812.1-201ENST00000432563 2267 ntBASIC22.08■■□□□ 1.12
TPM3P06753 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.07■■□□□ 1.12
TPM3P06753 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TPM3P06753 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms