Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HMGN1P05114 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
HMGN1P05114 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HMGN1P05114 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.87■□□□□ 0.45
HMGN1P05114 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HMGN1P05114 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.87■□□□□ 0.45
HMGN1P05114 AC004408.2-201ENST00000623613 2777 ntBASIC17.87■□□□□ 0.45
HMGN1P05114 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGN1P05114 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGN1P05114 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGN1P05114 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HMGN1P05114 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HMGN1P05114 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HMGN1P05114 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.86■□□□□ 0.45
HMGN1P05114 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HMGN1P05114 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HMGN1P05114 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HMGN1P05114 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 HLA-G-202ENST00000376815 851 ntBASIC17.86■□□□□ 0.45
HMGN1P05114 HLA-G-203ENST00000376818 1127 ntBASIC17.86■□□□□ 0.45
HMGN1P05114 MCRIP2P1-201ENST00000394346 511 ntBASIC17.86■□□□□ 0.45
HMGN1P05114 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.86■□□□□ 0.45
HMGN1P05114 AC013268.1-206ENST00000638368 961 ntBASIC17.86■□□□□ 0.45
HMGN1P05114 AC112229.1-201ENST00000639295 961 ntBASIC17.86■□□□□ 0.45
HMGN1P05114 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HMGN1P05114 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.86■□□□□ 0.45
HMGN1P05114 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.86■□□□□ 0.45
HMGN1P05114 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGN1P05114 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
HMGN1P05114 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.85■□□□□ 0.45
HMGN1P05114 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGN1P05114 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGN1P05114 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.85■□□□□ 0.45
HMGN1P05114 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.85■□□□□ 0.45
HMGN1P05114 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HMGN1P05114 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.85■□□□□ 0.45
HMGN1P05114 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGN1P05114 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HMGN1P05114 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGN1P05114 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.85■□□□□ 0.45
HMGN1P05114 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGN1P05114 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGN1P05114 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGN1P05114 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGN1P05114 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGN1P05114 AL032819.2-201ENST00000624543 2162 ntBASIC17.84■□□□□ 0.45
HMGN1P05114 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGN1P05114 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGN1P05114 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 MIR638-201ENST00000385237 100 ntBASIC17.84■□□□□ 0.45
HMGN1P05114 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.84■□□□□ 0.45
HMGN1P05114 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
HMGN1P05114 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGN1P05114 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms