Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD74P04233 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.61■□□□□ 0.25
CD74P04233 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD74P04233 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD74P04233 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD74P04233 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CD74P04233 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.61■□□□□ 0.25
CD74P04233 AC009113.1-201ENST00000570267 2443 ntBASIC16.6■□□□□ 0.25
CD74P04233 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD74P04233 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.6■□□□□ 0.25
CD74P04233 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD74P04233 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD74P04233 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD74P04233 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD74P04233 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.6■□□□□ 0.25
CD74P04233 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CD74P04233 AP001330.3-201ENST00000520123 633 ntBASIC16.6■□□□□ 0.25
CD74P04233 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
CD74P04233 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.6■□□□□ 0.25
CD74P04233 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CD74P04233 AC120498.9-201ENST00000339021 3867 ntBASIC16.6■□□□□ 0.25
CD74P04233 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CD74P04233 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.6■□□□□ 0.25
CD74P04233 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD74P04233 RASA4CP-201ENST00000424092 1398 ntBASIC16.6■□□□□ 0.25
CD74P04233 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD74P04233 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD74P04233 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.6■□□□□ 0.25
CD74P04233 AL161938.1-201ENST00000569833 2180 ntBASIC16.6■□□□□ 0.25
CD74P04233 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD74P04233 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CD74P04233 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.59■□□□□ 0.25
CD74P04233 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 IRS3P-201ENST00000223076 1006 ntBASIC16.59■□□□□ 0.25
CD74P04233 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.59■□□□□ 0.25
CD74P04233 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.59■□□□□ 0.25
CD74P04233 CDV3P1-201ENST00000471403 739 ntBASIC16.59■□□□□ 0.25
CD74P04233 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.59■□□□□ 0.25
CD74P04233 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.59■□□□□ 0.25
CD74P04233 AP001160.3-201ENST00000601484 763 ntBASIC16.59■□□□□ 0.25
CD74P04233 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.59■□□□□ 0.25
CD74P04233 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CD74P04233 AC135050.7-201ENST00000624508 2218 ntBASIC16.59■□□□□ 0.25
CD74P04233 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CD74P04233 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
CD74P04233 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD74P04233 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CD74P04233 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD74P04233 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD74P04233 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD74P04233 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.58■□□□□ 0.25
CD74P04233 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD74P04233 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CD74P04233 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD74P04233 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CD74P04233 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD74P04233 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD74P04233 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD74P04233 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD74P04233 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.58■□□□□ 0.24
CD74P04233 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.58■□□□□ 0.24
CD74P04233 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.58■□□□□ 0.24
CD74P04233 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD74P04233 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD74P04233 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.58■□□□□ 0.24
CD74P04233 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD74P04233 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD74P04233 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD74P04233 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD74P04233 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD74P04233 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CD74P04233 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CD74P04233 AC006333.2-201ENST00000607957 2099 ntBASIC16.58■□□□□ 0.24
CD74P04233 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CD74P04233 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.58■□□□□ 0.24
CD74P04233 AL390961.4-201ENST00000623958 2535 ntBASIC16.58■□□□□ 0.24
CD74P04233 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD74P04233 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD74P04233 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD74P04233 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.57■□□□□ 0.24
CD74P04233 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.57■□□□□ 0.24
CD74P04233 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.57■□□□□ 0.24
CD74P04233 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD74P04233 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms