Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRGV3P03979 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRGV3P03979 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.54■□□□□ 0.08
TRGV3P03979 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.54■□□□□ 0.08
TRGV3P03979 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.54■□□□□ 0.08
TRGV3P03979 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
TRGV3P03979 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.54■□□□□ 0.08
TRGV3P03979 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.54■□□□□ 0.08
TRGV3P03979 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRGV3P03979 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.54■□□□□ 0.08
TRGV3P03979 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRGV3P03979 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.54■□□□□ 0.08
TRGV3P03979 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.54■□□□□ 0.08
TRGV3P03979 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.54■□□□□ 0.08
TRGV3P03979 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.54■□□□□ 0.08
TRGV3P03979 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRGV3P03979 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.53■□□□□ 0.08
TRGV3P03979 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV3P03979 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRGV3P03979 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV3P03979 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV3P03979 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.53■□□□□ 0.08
TRGV3P03979 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TRGV3P03979 UNC93B4-201ENST00000505679 747 ntBASIC15.53■□□□□ 0.08
TRGV3P03979 AP003097.1-201ENST00000530657 1135 ntBASIC15.53■□□□□ 0.08
TRGV3P03979 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.53■□□□□ 0.08
TRGV3P03979 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.53■□□□□ 0.08
TRGV3P03979 AC008687.6-201ENST00000596318 630 ntBASIC15.53■□□□□ 0.08
TRGV3P03979 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.53■□□□□ 0.08
TRGV3P03979 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV3P03979 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.53■□□□□ 0.08
TRGV3P03979 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV3P03979 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV3P03979 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV3P03979 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.53■□□□□ 0.08
TRGV3P03979 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV3P03979 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.53■□□□□ 0.08
TRGV3P03979 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.53■□□□□ 0.08
TRGV3P03979 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV3P03979 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRGV3P03979 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV3P03979 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV3P03979 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV3P03979 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.52■□□□□ 0.08
TRGV3P03979 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.52■□□□□ 0.08
TRGV3P03979 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.52■□□□□ 0.08
TRGV3P03979 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV3P03979 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV3P03979 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.52■□□□□ 0.08
TRGV3P03979 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV3P03979 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV3P03979 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV3P03979 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV3P03979 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRGV3P03979 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.52■□□□□ 0.08
TRGV3P03979 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.52■□□□□ 0.08
TRGV3P03979 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRGV3P03979 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.52■□□□□ 0.08
TRGV3P03979 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV3P03979 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV3P03979 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.52■□□□□ 0.07
TRGV3P03979 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV3P03979 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV3P03979 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRGV3P03979 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
TRGV3P03979 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 AC112907.3-201ENST00000577781 2400 ntBASIC15.51■□□□□ 0.07
TRGV3P03979 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRGV3P03979 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.51■□□□□ 0.07
TRGV3P03979 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.51■□□□□ 0.07
TRGV3P03979 RPS2P52-201ENST00000469610 820 ntBASIC15.51■□□□□ 0.07
TRGV3P03979 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.51■□□□□ 0.07
TRGV3P03979 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRGV3P03979 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV3P03979 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.51■□□□□ 0.07
TRGV3P03979 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.51■□□□□ 0.07
TRGV3P03979 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms