Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AC117947.1-201ENST00000427448 529 ntBASIC22.06■■□□□ 1.12
PGK1P00558 UPK3BP1-201ENST00000428678 509 ntBASIC22.06■■□□□ 1.12
PGK1P00558 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.06■■□□□ 1.12
PGK1P00558 AC063952.2-201ENST00000498792 1227 ntBASIC22.06■■□□□ 1.12
PGK1P00558 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.06■■□□□ 1.12
PGK1P00558 AC130371.2-201ENST00000619443 611 ntBASIC22.06■■□□□ 1.12
PGK1P00558 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PGK1P00558 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PGK1P00558 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PGK1P00558 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PGK1P00558 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PGK1P00558 FEM1AP4-201ENST00000443167 1987 ntBASIC22.06■■□□□ 1.12
PGK1P00558 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PGK1P00558 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.06■■□□□ 1.12
PGK1P00558 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PGK1P00558 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PGK1P00558 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
PGK1P00558 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PGK1P00558 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PGK1P00558 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PGK1P00558 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PGK1P00558 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
PGK1P00558 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PGK1P00558 LINC00565-201ENST00000562710 2331 ntBASIC22.05■■□□□ 1.12
PGK1P00558 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PGK1P00558 AC008040.2-201ENST00000461049 708 ntBASIC22.05■■□□□ 1.12
PGK1P00558 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.05■■□□□ 1.12
PGK1P00558 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.05■■□□□ 1.12
PGK1P00558 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PGK1P00558 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PGK1P00558 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.04■■□□□ 1.12
PGK1P00558 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.04■■□□□ 1.12
PGK1P00558 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.04■■□□□ 1.12
PGK1P00558 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.04■■□□□ 1.12
PGK1P00558 AP000692.2-201ENST00000608391 879 ntBASIC22.04■■□□□ 1.12
PGK1P00558 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 AF106564.1-201ENST00000607058 2553 ntBASIC22.04■■□□□ 1.12
PGK1P00558 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.04■■□□□ 1.12
PGK1P00558 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PGK1P00558 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.04■■□□□ 1.12
PGK1P00558 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
PGK1P00558 RCC2P6-201ENST00000526625 1557 ntBASIC22.04■■□□□ 1.12
PGK1P00558 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PGK1P00558 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PGK1P00558 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.03■■□□□ 1.12
PGK1P00558 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.03■■□□□ 1.12
PGK1P00558 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.03■■□□□ 1.12
PGK1P00558 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.03■■□□□ 1.12
PGK1P00558 AC139887.4-201ENST00000607877 719 ntBASIC22.03■■□□□ 1.12
PGK1P00558 AC011298.2-201ENST00000617989 482 ntBASIC22.03■■□□□ 1.12
PGK1P00558 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 KRT16P6-202ENST00000425692 1426 ntBASIC22.03■■□□□ 1.12
PGK1P00558 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.03■■□□□ 1.12
PGK1P00558 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.03■■□□□ 1.12
PGK1P00558 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PGK1P00558 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
PGK1P00558 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PGK1P00558 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PGK1P00558 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PGK1P00558 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PGK1P00558 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PGK1P00558 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.02■■□□□ 1.12
PGK1P00558 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PGK1P00558 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.02■■□□□ 1.12
PGK1P00558 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PGK1P00558 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PGK1P00558 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PGK1P00558 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PGK1P00558 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.02■■□□□ 1.12
PGK1P00558 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PGK1P00558 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.02■■□□□ 1.12
PGK1P00558 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PGK1P00558 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.01■■□□□ 1.11
PGK1P00558 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.01■■□□□ 1.11
PGK1P00558 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PGK1P00558 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms