Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.4■□□□□ 0.7
CPNE6O95741 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.4■□□□□ 0.7
CPNE6O95741 KRT17P2-201ENST00000300992 1314 ntBASIC19.4■□□□□ 0.7
CPNE6O95741 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.4■□□□□ 0.7
CPNE6O95741 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.4■□□□□ 0.7
CPNE6O95741 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
CPNE6O95741 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 AL049796.1-201ENST00000565336 1766 ntBASIC19.39■□□□□ 0.7
CPNE6O95741 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.39■□□□□ 0.7
CPNE6O95741 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE6O95741 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.39■□□□□ 0.69
CPNE6O95741 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CPNE6O95741 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE6O95741 AC073314.1-201ENST00000568729 2216 ntBASIC19.39■□□□□ 0.69
CPNE6O95741 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE6O95741 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.39■□□□□ 0.69
CPNE6O95741 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.39■□□□□ 0.69
CPNE6O95741 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.39■□□□□ 0.69
CPNE6O95741 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE6O95741 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CPNE6O95741 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.39■□□□□ 0.69
CPNE6O95741 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.39■□□□□ 0.69
CPNE6O95741 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.39■□□□□ 0.69
CPNE6O95741 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.39■□□□□ 0.69
CPNE6O95741 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.39■□□□□ 0.69
CPNE6O95741 AL121829.2-201ENST00000620908 328 ntBASIC19.39■□□□□ 0.69
CPNE6O95741 AL049637.2-201ENST00000641778 930 ntBASIC19.39■□□□□ 0.69
CPNE6O95741 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.39■□□□□ 0.69
CPNE6O95741 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE6O95741 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CPNE6O95741 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE6O95741 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.39■□□□□ 0.69
CPNE6O95741 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE6O95741 AC121338.2-201ENST00000622535 1744 ntBASIC19.39■□□□□ 0.69
CPNE6O95741 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CPNE6O95741 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.38■□□□□ 0.69
CPNE6O95741 RARRES2P10-201ENST00000564312 460 ntBASIC19.38■□□□□ 0.69
CPNE6O95741 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.38■□□□□ 0.69
CPNE6O95741 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.38■□□□□ 0.69
CPNE6O95741 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CPNE6O95741 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE6O95741 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.38■□□□□ 0.69
CPNE6O95741 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CPNE6O95741 AC087289.5-201ENST00000586076 3175 ntBASIC19.38■□□□□ 0.69
CPNE6O95741 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE6O95741 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE6O95741 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE6O95741 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE6O95741 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE6O95741 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE6O95741 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE6O95741 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE6O95741 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.37■□□□□ 0.69
CPNE6O95741 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE6O95741 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.37■□□□□ 0.69
CPNE6O95741 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.37■□□□□ 0.69
CPNE6O95741 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE6O95741 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE6O95741 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE6O95741 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE6O95741 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE6O95741 TSPY7P-201ENST00000431358 1114 ntBASIC19.36■□□□□ 0.69
CPNE6O95741 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.36■□□□□ 0.69
CPNE6O95741 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.36■□□□□ 0.69
CPNE6O95741 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CPNE6O95741 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms