Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDM4BO94953 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KDM4BO94953 BCL2-203ENST00000589955 5011 ntBASIC17.31■□□□□ 0.36
KDM4BO94953 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.31■□□□□ 0.36
KDM4BO94953 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDM4BO94953 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDM4BO94953 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDM4BO94953 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
KDM4BO94953 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KDM4BO94953 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
KDM4BO94953 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.3■□□□□ 0.36
KDM4BO94953 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
KDM4BO94953 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDM4BO94953 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.3■□□□□ 0.36
KDM4BO94953 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.3■□□□□ 0.36
KDM4BO94953 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
KDM4BO94953 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDM4BO94953 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KDM4BO94953 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.3■□□□□ 0.36
KDM4BO94953 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
KDM4BO94953 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.3■□□□□ 0.36
KDM4BO94953 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.3■□□□□ 0.36
KDM4BO94953 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.3■□□□□ 0.36
KDM4BO94953 UBE2DNL-204ENST00000602536 740 ntBASIC17.3■□□□□ 0.36
KDM4BO94953 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
KDM4BO94953 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
KDM4BO94953 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KDM4BO94953 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDM4BO94953 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KDM4BO94953 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KDM4BO94953 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
KDM4BO94953 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.29■□□□□ 0.36
KDM4BO94953 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.29■□□□□ 0.36
KDM4BO94953 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
KDM4BO94953 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.29■□□□□ 0.36
KDM4BO94953 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.29■□□□□ 0.36
KDM4BO94953 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.29■□□□□ 0.36
KDM4BO94953 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.29■□□□□ 0.36
KDM4BO94953 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.29■□□□□ 0.36
KDM4BO94953 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
KDM4BO94953 MYCNOS-205ENST00000641950 531 ntBASIC17.29■□□□□ 0.36
KDM4BO94953 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.29■□□□□ 0.36
KDM4BO94953 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.29■□□□□ 0.36
KDM4BO94953 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.29■□□□□ 0.36
KDM4BO94953 AC093484.2-201ENST00000580996 2166 ntBASIC17.29■□□□□ 0.36
KDM4BO94953 DPP3P2-201ENST00000416030 1696 ntBASIC17.29■□□□□ 0.36
KDM4BO94953 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.29■□□□□ 0.36
KDM4BO94953 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
KDM4BO94953 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KDM4BO94953 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDM4BO94953 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KDM4BO94953 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDM4BO94953 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.28■□□□□ 0.36
KDM4BO94953 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
KDM4BO94953 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDM4BO94953 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
KDM4BO94953 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.28■□□□□ 0.36
KDM4BO94953 CDV3P1-201ENST00000471403 739 ntBASIC17.28■□□□□ 0.36
KDM4BO94953 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.28■□□□□ 0.36
KDM4BO94953 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
KDM4BO94953 FAM21FP-204ENST00000608637 956 ntBASIC17.28■□□□□ 0.36
KDM4BO94953 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDM4BO94953 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDM4BO94953 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDM4BO94953 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KDM4BO94953 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDM4BO94953 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDM4BO94953 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.28■□□□□ 0.36
KDM4BO94953 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KDM4BO94953 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
KDM4BO94953 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KDM4BO94953 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KDM4BO94953 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KDM4BO94953 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.27■□□□□ 0.36
KDM4BO94953 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.27■□□□□ 0.36
KDM4BO94953 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KDM4BO94953 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
KDM4BO94953 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
KDM4BO94953 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.27■□□□□ 0.36
KDM4BO94953 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KDM4BO94953 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms