Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNRNP200O75643 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNRNP200O75643 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SNRNP200O75643 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
SNRNP200O75643 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNRNP200O75643 AC073130.3-201ENST00000624389 2278 ntBASIC18.96■□□□□ 0.63
SNRNP200O75643 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNRNP200O75643 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.96■□□□□ 0.63
SNRNP200O75643 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNRNP200O75643 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.62
SNRNP200O75643 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.96■□□□□ 0.62
SNRNP200O75643 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.62
SNRNP200O75643 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SNRNP200O75643 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SNRNP200O75643 AC110285.5-201ENST00000611501 352 ntBASIC18.95■□□□□ 0.62
SNRNP200O75643 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.95■□□□□ 0.62
SNRNP200O75643 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.95■□□□□ 0.62
SNRNP200O75643 AC116351.2-201ENST00000606540 1585 ntBASIC18.95■□□□□ 0.62
SNRNP200O75643 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SNRNP200O75643 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 KRT16P6-202ENST00000425692 1426 ntBASIC18.95■□□□□ 0.62
SNRNP200O75643 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.95■□□□□ 0.62
SNRNP200O75643 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.95■□□□□ 0.62
SNRNP200O75643 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.95■□□□□ 0.62
SNRNP200O75643 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.95■□□□□ 0.62
SNRNP200O75643 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.95■□□□□ 0.62
SNRNP200O75643 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNRNP200O75643 AC125437.2-201ENST00000625180 2167 ntBASIC18.94■□□□□ 0.62
SNRNP200O75643 AFG3L1P-217ENST00000557444 2447 ntBASIC18.94■□□□□ 0.62
SNRNP200O75643 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNRNP200O75643 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRNP200O75643 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.94■□□□□ 0.62
SNRNP200O75643 KRT16P5-201ENST00000455284 522 ntBASIC18.94■□□□□ 0.62
SNRNP200O75643 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.94■□□□□ 0.62
SNRNP200O75643 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.94■□□□□ 0.62
SNRNP200O75643 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SNRNP200O75643 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRNP200O75643 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRNP200O75643 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRNP200O75643 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.94■□□□□ 0.62
SNRNP200O75643 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNRNP200O75643 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SNRNP200O75643 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SNRNP200O75643 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNRNP200O75643 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.94■□□□□ 0.62
SNRNP200O75643 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNRNP200O75643 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.94■□□□□ 0.62
SNRNP200O75643 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.94■□□□□ 0.62
SNRNP200O75643 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SNRNP200O75643 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SNRNP200O75643 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRNP200O75643 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRNP200O75643 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.93■□□□□ 0.62
SNRNP200O75643 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNRNP200O75643 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRNP200O75643 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNRNP200O75643 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNRNP200O75643 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.93■□□□□ 0.62
SNRNP200O75643 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.93■□□□□ 0.62
SNRNP200O75643 HLA-G-202ENST00000376815 851 ntBASIC18.93■□□□□ 0.62
SNRNP200O75643 HLA-G-203ENST00000376818 1127 ntBASIC18.93■□□□□ 0.62
SNRNP200O75643 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.93■□□□□ 0.62
SNRNP200O75643 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.93■□□□□ 0.62
SNRNP200O75643 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNRNP200O75643 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.93■□□□□ 0.62
SNRNP200O75643 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNRNP200O75643 C1QL1P1-201ENST00000568105 661 ntBASIC18.93■□□□□ 0.62
SNRNP200O75643 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.93■□□□□ 0.62
SNRNP200O75643 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SNRNP200O75643 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.93■□□□□ 0.62
SNRNP200O75643 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNRNP200O75643 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.92■□□□□ 0.62
SNRNP200O75643 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP200O75643 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP200O75643 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SNRNP200O75643 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP200O75643 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.92■□□□□ 0.62
SNRNP200O75643 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP200O75643 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP200O75643 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.92■□□□□ 0.62
SNRNP200O75643 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SNRNP200O75643 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.92■□□□□ 0.62
SNRNP200O75643 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SNRNP200O75643 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP200O75643 RARRES2P10-201ENST00000564312 460 ntBASIC18.92■□□□□ 0.62
SNRNP200O75643 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNRNP200O75643 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SNRNP200O75643 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms