Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.31■□□□□ 0.68
GFRA3O60609 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.31■□□□□ 0.68
GFRA3O60609 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
GFRA3O60609 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.31■□□□□ 0.68
GFRA3O60609 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA3O60609 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.31■□□□□ 0.68
GFRA3O60609 AP002414.4-201ENST00000589764 1148 ntBASIC19.31■□□□□ 0.68
GFRA3O60609 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
GFRA3O60609 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.31■□□□□ 0.68
GFRA3O60609 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
GFRA3O60609 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
GFRA3O60609 AC016734.2-201ENST00000624325 1377 ntBASIC19.31■□□□□ 0.68
GFRA3O60609 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.3■□□□□ 0.68
GFRA3O60609 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
GFRA3O60609 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA3O60609 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA3O60609 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA3O60609 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA3O60609 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA3O60609 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA3O60609 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA3O60609 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.3■□□□□ 0.68
GFRA3O60609 SPDYE15P-201ENST00000424157 909 ntBASIC19.3■□□□□ 0.68
GFRA3O60609 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.3■□□□□ 0.68
GFRA3O60609 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
GFRA3O60609 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.3■□□□□ 0.68
GFRA3O60609 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA3O60609 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.3■□□□□ 0.68
GFRA3O60609 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
GFRA3O60609 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA3O60609 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFRA3O60609 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.3■□□□□ 0.68
GFRA3O60609 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.3■□□□□ 0.68
GFRA3O60609 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.29■□□□□ 0.68
GFRA3O60609 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.29■□□□□ 0.68
GFRA3O60609 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
GFRA3O60609 AP002383.4-201ENST00000442518 975 ntBASIC19.29■□□□□ 0.68
GFRA3O60609 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.29■□□□□ 0.68
GFRA3O60609 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.29■□□□□ 0.68
GFRA3O60609 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.29■□□□□ 0.68
GFRA3O60609 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 GCSHP2-201ENST00000560971 527 ntBASIC19.29■□□□□ 0.68
GFRA3O60609 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.29■□□□□ 0.68
GFRA3O60609 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.29■□□□□ 0.68
GFRA3O60609 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
GFRA3O60609 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GFRA3O60609 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GFRA3O60609 BX119927.1-201ENST00000636596 1552 ntBASIC19.28■□□□□ 0.68
GFRA3O60609 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
GFRA3O60609 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GFRA3O60609 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.28■□□□□ 0.68
GFRA3O60609 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.28■□□□□ 0.68
GFRA3O60609 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
GFRA3O60609 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GFRA3O60609 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.28■□□□□ 0.68
GFRA3O60609 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.28■□□□□ 0.68
GFRA3O60609 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.28■□□□□ 0.68
GFRA3O60609 AC011498.5-201ENST00000592027 486 ntBASIC19.28■□□□□ 0.68
GFRA3O60609 AL121912.1-201ENST00000603683 238 ntBASIC19.28■□□□□ 0.68
GFRA3O60609 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.28■□□□□ 0.68
GFRA3O60609 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GFRA3O60609 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GFRA3O60609 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.28■□□□□ 0.68
GFRA3O60609 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GFRA3O60609 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GFRA3O60609 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.27■□□□□ 0.68
GFRA3O60609 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GFRA3O60609 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GFRA3O60609 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GFRA3O60609 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GFRA3O60609 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GFRA3O60609 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.27■□□□□ 0.68
GFRA3O60609 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.27■□□□□ 0.68
GFRA3O60609 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.27■□□□□ 0.68
GFRA3O60609 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.27■□□□□ 0.68
GFRA3O60609 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.27■□□□□ 0.68
GFRA3O60609 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
GFRA3O60609 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
GFRA3O60609 KRT18P58-201ENST00000527480 1120 ntBASIC19.27■□□□□ 0.68
GFRA3O60609 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GFRA3O60609 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.27■□□□□ 0.68
GFRA3O60609 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.27■□□□□ 0.68
GFRA3O60609 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
GFRA3O60609 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GFRA3O60609 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GFRA3O60609 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.27■□□□□ 0.67
GFRA3O60609 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GFRA3O60609 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms