Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CREB3O43889 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CREB3O43889 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CREB3O43889 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CREB3O43889 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CREB3O43889 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.58■□□□□ 0.89
CREB3O43889 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CREB3O43889 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CREB3O43889 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.58■□□□□ 0.89
CREB3O43889 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.58■□□□□ 0.89
CREB3O43889 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.58■□□□□ 0.89
CREB3O43889 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.58■□□□□ 0.89
CREB3O43889 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.58■□□□□ 0.89
CREB3O43889 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CREB3O43889 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.58■□□□□ 0.89
CREB3O43889 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CREB3O43889 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CREB3O43889 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CREB3O43889 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.58■□□□□ 0.88
CREB3O43889 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
CREB3O43889 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CREB3O43889 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CREB3O43889 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CREB3O43889 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CREB3O43889 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.57■□□□□ 0.88
CREB3O43889 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CREB3O43889 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.57■□□□□ 0.88
CREB3O43889 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.57■□□□□ 0.88
CREB3O43889 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CREB3O43889 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CREB3O43889 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.57■□□□□ 0.88
CREB3O43889 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CREB3O43889 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CREB3O43889 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.57■□□□□ 0.88
CREB3O43889 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.57■□□□□ 0.88
CREB3O43889 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.57■□□□□ 0.88
CREB3O43889 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.57■□□□□ 0.88
CREB3O43889 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CREB3O43889 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CREB3O43889 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CREB3O43889 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.57■□□□□ 0.88
CREB3O43889 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CREB3O43889 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.57■□□□□ 0.88
CREB3O43889 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CREB3O43889 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CREB3O43889 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CREB3O43889 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CREB3O43889 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CREB3O43889 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.56■□□□□ 0.88
CREB3O43889 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CREB3O43889 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CREB3O43889 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.56■□□□□ 0.88
CREB3O43889 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CREB3O43889 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.56■□□□□ 0.88
CREB3O43889 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.56■□□□□ 0.88
CREB3O43889 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CREB3O43889 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.56■□□□□ 0.88
CREB3O43889 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.56■□□□□ 0.88
CREB3O43889 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.56■□□□□ 0.88
CREB3O43889 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CREB3O43889 KRT18P6-201ENST00000555540 1265 ntBASIC20.56■□□□□ 0.88
CREB3O43889 SOX15-203ENST00000570788 1093 ntBASIC20.56■□□□□ 0.88
CREB3O43889 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.56■□□□□ 0.88
CREB3O43889 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CREB3O43889 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CREB3O43889 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.56■□□□□ 0.88
CREB3O43889 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.56■□□□□ 0.88
CREB3O43889 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.56■□□□□ 0.88
CREB3O43889 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CREB3O43889 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CREB3O43889 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.55■□□□□ 0.88
CREB3O43889 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CREB3O43889 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3O43889 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3O43889 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3O43889 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3O43889 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3O43889 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3O43889 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.55■□□□□ 0.88
CREB3O43889 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.55■□□□□ 0.88
CREB3O43889 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CREB3O43889 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.55■□□□□ 0.88
CREB3O43889 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.55■□□□□ 0.88
CREB3O43889 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CREB3O43889 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.55■□□□□ 0.88
CREB3O43889 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CREB3O43889 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.55■□□□□ 0.88
CREB3O43889 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3O43889 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3O43889 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3O43889 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3O43889 AC124283.5-201ENST00000624661 1809 ntBASIC20.55■□□□□ 0.88
CREB3O43889 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.55■□□□□ 0.88
CREB3O43889 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.54■□□□□ 0.88
CREB3O43889 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3O43889 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3O43889 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CREB3O43889 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3O43889 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.54■□□□□ 0.88
CREB3O43889 PHGDH-210ENST00000641115 1638 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms