Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.37■□□□□ 0.69
ITM2AO43736 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ITM2AO43736 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.37■□□□□ 0.69
ITM2AO43736 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.37■□□□□ 0.69
ITM2AO43736 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.37■□□□□ 0.69
ITM2AO43736 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.37■□□□□ 0.69
ITM2AO43736 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.37■□□□□ 0.69
ITM2AO43736 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.37■□□□□ 0.69
ITM2AO43736 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ITM2AO43736 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITM2AO43736 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ITM2AO43736 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ITM2AO43736 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ITM2AO43736 AC120498.9-201ENST00000339021 3867 ntBASIC19.36■□□□□ 0.69
ITM2AO43736 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.36■□□□□ 0.69
ITM2AO43736 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ITM2AO43736 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.36■□□□□ 0.69
ITM2AO43736 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ITM2AO43736 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 AC010536.3-201ENST00000620306 533 ntBASIC19.36■□□□□ 0.69
ITM2AO43736 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.36■□□□□ 0.69
ITM2AO43736 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITM2AO43736 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ITM2AO43736 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.35■□□□□ 0.69
ITM2AO43736 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.35■□□□□ 0.69
ITM2AO43736 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ITM2AO43736 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
ITM2AO43736 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.35■□□□□ 0.69
ITM2AO43736 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ITM2AO43736 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ITM2AO43736 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
ITM2AO43736 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITM2AO43736 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITM2AO43736 KRT8P20-201ENST00000423953 1409 ntBASIC19.34■□□□□ 0.69
ITM2AO43736 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITM2AO43736 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITM2AO43736 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
ITM2AO43736 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ITM2AO43736 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.34■□□□□ 0.69
ITM2AO43736 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITM2AO43736 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITM2AO43736 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITM2AO43736 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ITM2AO43736 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.34■□□□□ 0.69
ITM2AO43736 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ITM2AO43736 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.34■□□□□ 0.69
ITM2AO43736 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.34■□□□□ 0.69
ITM2AO43736 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.34■□□□□ 0.69
ITM2AO43736 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ITM2AO43736 LETM1P2-201ENST00000597330 2178 ntBASIC19.34■□□□□ 0.69
ITM2AO43736 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITM2AO43736 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITM2AO43736 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITM2AO43736 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITM2AO43736 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ITM2AO43736 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITM2AO43736 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITM2AO43736 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms