Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SEMA3EO15041 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SEMA3EO15041 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SEMA3EO15041 RBM17P1-201ENST00000453646 1190 ntBASIC23.86■■□□□ 1.41
SEMA3EO15041 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SEMA3EO15041 AL031985.4-201ENST00000642138 673 ntBASIC23.86■■□□□ 1.41
SEMA3EO15041 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SEMA3EO15041 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SEMA3EO15041 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SEMA3EO15041 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SEMA3EO15041 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
SEMA3EO15041 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SEMA3EO15041 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.85■■□□□ 1.41
SEMA3EO15041 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.85■■□□□ 1.41
SEMA3EO15041 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SEMA3EO15041 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SEMA3EO15041 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.85■■□□□ 1.41
SEMA3EO15041 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.85■■□□□ 1.41
SEMA3EO15041 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.85■■□□□ 1.41
SEMA3EO15041 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.85■■□□□ 1.41
SEMA3EO15041 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.85■■□□□ 1.41
SEMA3EO15041 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.85■■□□□ 1.41
SEMA3EO15041 AC012306.2-201ENST00000609350 630 ntBASIC23.85■■□□□ 1.41
SEMA3EO15041 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.85■■□□□ 1.41
SEMA3EO15041 AC097493.4-201ENST00000641197 219 ntBASIC23.85■■□□□ 1.41
SEMA3EO15041 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
SEMA3EO15041 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SEMA3EO15041 TMEM179-206ENST00000616017 1645 ntBASIC23.84■■□□□ 1.41
SEMA3EO15041 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SEMA3EO15041 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SEMA3EO15041 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
SEMA3EO15041 AL162377.1-201ENST00000618844 1793 ntBASIC23.84■■□□□ 1.41
SEMA3EO15041 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.84■■□□□ 1.41
SEMA3EO15041 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SEMA3EO15041 MMP23A-201ENST00000234610 1017 ntBASIC23.84■■□□□ 1.41
SEMA3EO15041 UNC93B2-201ENST00000285383 730 ntBASIC23.84■■□□□ 1.41
SEMA3EO15041 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
SEMA3EO15041 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SEMA3EO15041 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.84■■□□□ 1.41
SEMA3EO15041 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.84■■□□□ 1.41
SEMA3EO15041 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.84■■□□□ 1.41
SEMA3EO15041 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SEMA3EO15041 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SEMA3EO15041 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SEMA3EO15041 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SEMA3EO15041 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SEMA3EO15041 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.83■■□□□ 1.41
SEMA3EO15041 GABARAPL3-202ENST00000624044 1851 ntBASIC23.83■■□□□ 1.41
SEMA3EO15041 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SEMA3EO15041 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SEMA3EO15041 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SEMA3EO15041 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.83■■□□□ 1.41
SEMA3EO15041 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SEMA3EO15041 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SEMA3EO15041 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.83■■□□□ 1.41
SEMA3EO15041 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SEMA3EO15041 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.83■■□□□ 1.41
SEMA3EO15041 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.83■■□□□ 1.41
SEMA3EO15041 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.83■■□□□ 1.4
SEMA3EO15041 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SEMA3EO15041 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SEMA3EO15041 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SEMA3EO15041 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SEMA3EO15041 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SEMA3EO15041 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SEMA3EO15041 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SEMA3EO15041 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SEMA3EO15041 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SEMA3EO15041 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SEMA3EO15041 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SEMA3EO15041 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.82■■□□□ 1.4
SEMA3EO15041 AC079598.2-202ENST00000546624 1451 ntBASIC23.81■■□□□ 1.4
SEMA3EO15041 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SEMA3EO15041 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SEMA3EO15041 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SEMA3EO15041 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.81■■□□□ 1.4
SEMA3EO15041 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SEMA3EO15041 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SEMA3EO15041 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SEMA3EO15041 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SEMA3EO15041 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SEMA3EO15041 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SEMA3EO15041 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SEMA3EO15041 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SEMA3EO15041 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.81■■□□□ 1.4
SEMA3EO15041 AC133561.5-201ENST00000635547 218 ntBASIC23.81■■□□□ 1.4
SEMA3EO15041 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SEMA3EO15041 FEM1AP1-201ENST00000431297 1995 ntBASIC23.81■■□□□ 1.4
SEMA3EO15041 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SEMA3EO15041 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SEMA3EO15041 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SEMA3EO15041 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SEMA3EO15041 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.81■■□□□ 1.4
SEMA3EO15041 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SEMA3EO15041 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SEMA3EO15041 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SEMA3EO15041 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.8■■□□□ 1.4
SEMA3EO15041 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SEMA3EO15041 AC004980.1-204ENST00000429707 299 ntBASIC23.8■■□□□ 1.4
SEMA3EO15041 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms