Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDX4O14627 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDX4O14627 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.14■□□□□ 0.65
CDX4O14627 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDX4O14627 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CDX4O14627 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDX4O14627 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDX4O14627 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.14■□□□□ 0.65
CDX4O14627 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.14■□□□□ 0.65
CDX4O14627 AL441883.1-201ENST00000566170 1045 ntBASIC19.14■□□□□ 0.65
CDX4O14627 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.14■□□□□ 0.65
CDX4O14627 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.14■□□□□ 0.65
CDX4O14627 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.14■□□□□ 0.65
CDX4O14627 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDX4O14627 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDX4O14627 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CDX4O14627 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDX4O14627 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDX4O14627 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.14■□□□□ 0.65
CDX4O14627 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDX4O14627 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDX4O14627 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CDX4O14627 AL121603.2-201ENST00000557373 2117 ntBASIC19.13■□□□□ 0.65
CDX4O14627 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDX4O14627 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDX4O14627 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDX4O14627 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDX4O14627 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDX4O14627 TSPY17P-201ENST00000450329 467 ntBASIC19.13■□□□□ 0.65
CDX4O14627 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.13■□□□□ 0.65
CDX4O14627 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.13■□□□□ 0.65
CDX4O14627 PRSS44-201ENST00000515154 1146 ntBASIC19.13■□□□□ 0.65
CDX4O14627 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.13■□□□□ 0.65
CDX4O14627 AL353719.1-201ENST00000566847 864 ntBASIC19.13■□□□□ 0.65
CDX4O14627 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDX4O14627 AC069148.1-201ENST00000608741 768 ntBASIC19.13■□□□□ 0.65
CDX4O14627 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.13■□□□□ 0.65
CDX4O14627 AC018553.1-201ENST00000616682 1458 ntBASIC19.13■□□□□ 0.65
CDX4O14627 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.13■□□□□ 0.65
CDX4O14627 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDX4O14627 GUSBP5-202ENST00000510805 1989 ntBASIC19.13■□□□□ 0.65
CDX4O14627 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDX4O14627 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDX4O14627 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDX4O14627 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDX4O14627 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.12■□□□□ 0.65
CDX4O14627 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDX4O14627 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDX4O14627 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.12■□□□□ 0.65
CDX4O14627 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDX4O14627 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDX4O14627 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.12■□□□□ 0.65
CDX4O14627 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.12■□□□□ 0.65
CDX4O14627 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.12■□□□□ 0.65
CDX4O14627 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.12■□□□□ 0.65
CDX4O14627 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CDX4O14627 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.12■□□□□ 0.65
CDX4O14627 AL512604.3-201ENST00000569583 964 ntBASIC19.12■□□□□ 0.65
CDX4O14627 AC140113.3-201ENST00000605663 199 ntBASIC19.12■□□□□ 0.65
CDX4O14627 AL023973.1-201ENST00000624619 620 ntBASIC19.12■□□□□ 0.65
CDX4O14627 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CDX4O14627 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDX4O14627 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDX4O14627 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDX4O14627 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CDX4O14627 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.12■□□□□ 0.65
CDX4O14627 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDX4O14627 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDX4O14627 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDX4O14627 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.11■□□□□ 0.65
CDX4O14627 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDX4O14627 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDX4O14627 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.11■□□□□ 0.65
CDX4O14627 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDX4O14627 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.11■□□□□ 0.65
CDX4O14627 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.11■□□□□ 0.65
CDX4O14627 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDX4O14627 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDX4O14627 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.11■□□□□ 0.65
CDX4O14627 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.11■□□□□ 0.65
CDX4O14627 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDX4O14627 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.11■□□□□ 0.65
CDX4O14627 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDX4O14627 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.11■□□□□ 0.65
CDX4O14627 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDX4O14627 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDX4O14627 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.1■□□□□ 0.65
CDX4O14627 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.1■□□□□ 0.65
CDX4O14627 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.1■□□□□ 0.65
CDX4O14627 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDX4O14627 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CDX4O14627 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.1■□□□□ 0.65
CDX4O14627 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.1■□□□□ 0.65
CDX4O14627 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDX4O14627 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDX4O14627 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDX4O14627 KRT18P38-201ENST00000449496 1282 ntBASIC19.1■□□□□ 0.65
CDX4O14627 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDX4O14627 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDX4O14627 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms