Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN4O14493 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN4O14493 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN4O14493 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN4O14493 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLDN4O14493 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLDN4O14493 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN4O14493 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN4O14493 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLDN4O14493 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 AC018553.1-201ENST00000616682 1458 ntBASIC18.61■□□□□ 0.57
CLDN4O14493 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.61■□□□□ 0.57
CLDN4O14493 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN4O14493 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLDN4O14493 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN4O14493 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.61■□□□□ 0.57
CLDN4O14493 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN4O14493 TMEM191A-211ENST00000637163 1067 ntBASIC18.61■□□□□ 0.57
CLDN4O14493 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN4O14493 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CLDN4O14493 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN4O14493 AL691432.2-201ENST00000607222 2038 ntBASIC18.61■□□□□ 0.57
CLDN4O14493 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN4O14493 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN4O14493 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN4O14493 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CLDN4O14493 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CLDN4O14493 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.6■□□□□ 0.57
CLDN4O14493 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.6■□□□□ 0.57
CLDN4O14493 RN7SL471P-201ENST00000580476 299 ntBASIC18.6■□□□□ 0.57
CLDN4O14493 MTDHP1-201ENST00000605323 784 ntBASIC18.6■□□□□ 0.57
CLDN4O14493 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN4O14493 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN4O14493 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN4O14493 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN4O14493 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN4O14493 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN4O14493 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN4O14493 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN4O14493 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN4O14493 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN4O14493 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
CLDN4O14493 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN4O14493 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN4O14493 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN4O14493 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.59■□□□□ 0.57
CLDN4O14493 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN4O14493 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLDN4O14493 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN4O14493 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN4O14493 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN4O14493 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLDN4O14493 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN4O14493 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLDN4O14493 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN4O14493 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CLDN4O14493 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms