Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 AC093503.3-201ENST00000624917 2352 ntBASIC18.74■□□□□ 0.59
UPK1AO00322 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.74■□□□□ 0.59
UPK1AO00322 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.74■□□□□ 0.59
UPK1AO00322 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.74■□□□□ 0.59
UPK1AO00322 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.74■□□□□ 0.59
UPK1AO00322 MIPEPP3-201ENST00000412105 444 ntBASIC18.74■□□□□ 0.59
UPK1AO00322 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.74■□□□□ 0.59
UPK1AO00322 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
UPK1AO00322 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
UPK1AO00322 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.74■□□□□ 0.59
UPK1AO00322 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.74■□□□□ 0.59
UPK1AO00322 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
UPK1AO00322 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1AO00322 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
UPK1AO00322 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1AO00322 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1AO00322 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
UPK1AO00322 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
UPK1AO00322 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1AO00322 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.73■□□□□ 0.59
UPK1AO00322 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1AO00322 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.73■□□□□ 0.59
UPK1AO00322 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
UPK1AO00322 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1AO00322 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
UPK1AO00322 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1AO00322 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UPK1AO00322 GPX1P1-201ENST00000388829 606 ntBASIC18.73■□□□□ 0.59
UPK1AO00322 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.73■□□□□ 0.59
UPK1AO00322 GUSBP6-202ENST00000438529 1198 ntBASIC18.73■□□□□ 0.59
UPK1AO00322 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.73■□□□□ 0.59
UPK1AO00322 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1AO00322 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1AO00322 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1AO00322 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1AO00322 KRT8P17-201ENST00000453110 1448 ntBASIC18.73■□□□□ 0.59
UPK1AO00322 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1AO00322 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1AO00322 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.72■□□□□ 0.59
UPK1AO00322 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1AO00322 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1AO00322 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1AO00322 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
UPK1AO00322 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.72■□□□□ 0.59
UPK1AO00322 Z82202.1-201ENST00000623446 1880 ntBASIC18.72■□□□□ 0.59
UPK1AO00322 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1AO00322 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.72■□□□□ 0.59
UPK1AO00322 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1AO00322 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
UPK1AO00322 TSPY6P-201ENST00000448518 926 ntBASIC18.72■□□□□ 0.59
UPK1AO00322 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
UPK1AO00322 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.72■□□□□ 0.59
UPK1AO00322 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.72■□□□□ 0.59
UPK1AO00322 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1AO00322 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.72■□□□□ 0.59
UPK1AO00322 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1AO00322 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1AO00322 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1AO00322 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1AO00322 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
UPK1AO00322 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1AO00322 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1AO00322 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1AO00322 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.71■□□□□ 0.59
UPK1AO00322 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.71■□□□□ 0.59
UPK1AO00322 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1AO00322 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.71■□□□□ 0.59
UPK1AO00322 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.71■□□□□ 0.59
UPK1AO00322 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.71■□□□□ 0.59
UPK1AO00322 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1AO00322 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1AO00322 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1AO00322 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1AO00322 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.71■□□□□ 0.59
UPK1AO00322 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.71■□□□□ 0.59
UPK1AO00322 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
UPK1AO00322 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
UPK1AO00322 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1AO00322 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms