Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
TLR4O00206 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.6■□□□□ 0.73
TLR4O00206 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.6■□□□□ 0.73
TLR4O00206 REXO1L10P-201ENST00000615707 1290 ntBASIC19.6■□□□□ 0.73
TLR4O00206 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TLR4O00206 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TLR4O00206 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TLR4O00206 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TLR4O00206 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TLR4O00206 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TLR4O00206 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TLR4O00206 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.6■□□□□ 0.73
TLR4O00206 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TLR4O00206 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.59■□□□□ 0.73
TLR4O00206 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.59■□□□□ 0.73
TLR4O00206 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TLR4O00206 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TLR4O00206 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 UNC93B2-201ENST00000285383 730 ntBASIC19.59■□□□□ 0.73
TLR4O00206 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TLR4O00206 KSR1P1-201ENST00000446298 240 ntBASIC19.59■□□□□ 0.73
TLR4O00206 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.59■□□□□ 0.73
TLR4O00206 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.59■□□□□ 0.73
TLR4O00206 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.59■□□□□ 0.73
TLR4O00206 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.59■□□□□ 0.73
TLR4O00206 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TLR4O00206 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TLR4O00206 FP700111.2-201ENST00000619190 1892 ntBASIC19.58■□□□□ 0.73
TLR4O00206 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TLR4O00206 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TLR4O00206 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
TLR4O00206 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TLR4O00206 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.58■□□□□ 0.73
TLR4O00206 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TLR4O00206 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
TLR4O00206 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TLR4O00206 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.58■□□□□ 0.72
TLR4O00206 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
TLR4O00206 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
TLR4O00206 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.58■□□□□ 0.72
TLR4O00206 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.58■□□□□ 0.72
TLR4O00206 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.58■□□□□ 0.72
TLR4O00206 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.58■□□□□ 0.72
TLR4O00206 CR392000.1-201ENST00000624770 1228 ntBASIC19.58■□□□□ 0.72
TLR4O00206 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TLR4O00206 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.58■□□□□ 0.72
TLR4O00206 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TLR4O00206 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TLR4O00206 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TLR4O00206 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TLR4O00206 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TLR4O00206 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TLR4O00206 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.57■□□□□ 0.72
TLR4O00206 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TLR4O00206 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TLR4O00206 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TLR4O00206 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TLR4O00206 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TLR4O00206 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TLR4O00206 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TLR4O00206 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TLR4O00206 AC079598.2-202ENST00000546624 1451 ntBASIC19.57■□□□□ 0.72
TLR4O00206 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.57■□□□□ 0.72
TLR4O00206 NIFKP9-201ENST00000419265 221 ntBASIC19.57■□□□□ 0.72
TLR4O00206 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.57■□□□□ 0.72
TLR4O00206 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.57■□□□□ 0.72
TLR4O00206 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TLR4O00206 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TLR4O00206 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TLR4O00206 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.56■□□□□ 0.72
TLR4O00206 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR4O00206 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TLR4O00206 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR4O00206 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR4O00206 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.56■□□□□ 0.72
TLR4O00206 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.56■□□□□ 0.72
TLR4O00206 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.56■□□□□ 0.72
TLR4O00206 AP000525.1-201ENST00000608286 694 ntBASIC19.56■□□□□ 0.72
TLR4O00206 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TLR4O00206 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TLR4O00206 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.56■□□□□ 0.72
TLR4O00206 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR4O00206 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TLR4O00206 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
TLR4O00206 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.56■□□□□ 0.72
TLR4O00206 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TLR4O00206 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms