Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 TREX1-205ENST00000625293 1783 ntBASIC20.42■□□□□ 0.86
SRRM3A6NNA2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRRM3A6NNA2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.42■□□□□ 0.86
SRRM3A6NNA2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 UNC93B5-201ENST00000530315 699 ntBASIC20.41■□□□□ 0.86
SRRM3A6NNA2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 MYC-209ENST00000641252 345 ntBASIC20.41■□□□□ 0.86
SRRM3A6NNA2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM3A6NNA2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 CYP2T1P-201ENST00000432607 1285 ntBASIC20.4■□□□□ 0.86
SRRM3A6NNA2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 AC020916.1-201ENST00000587762 1774 ntBASIC20.4■□□□□ 0.86
SRRM3A6NNA2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRRM3A6NNA2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.86
SRRM3A6NNA2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SRRM3A6NNA2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SRRM3A6NNA2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SRRM3A6NNA2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SRRM3A6NNA2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.39■□□□□ 0.86
SRRM3A6NNA2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SRRM3A6NNA2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRRM3A6NNA2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SRRM3A6NNA2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRRM3A6NNA2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRRM3A6NNA2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SRRM3A6NNA2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRRM3A6NNA2 AC026366.1-201ENST00000488803 879 ntBASIC20.39■□□□□ 0.85
SRRM3A6NNA2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SRRM3A6NNA2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SRRM3A6NNA2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRRM3A6NNA2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SRRM3A6NNA2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRRM3A6NNA2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SRRM3A6NNA2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms